Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TCRAP04437 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 AL049796.1-201ENST00000565336 1766 ntBASIC16.16■□□□□ 0.18
TCRAP04437 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
TCRAP04437 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.16■□□□□ 0.18
TCRAP04437 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TCRAP04437 AC012354.3-201ENST00000623734 483 ntBASIC16.16■□□□□ 0.18
TCRAP04437 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCRAP04437 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.15■□□□□ 0.18
TCRAP04437 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
TCRAP04437 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRAP04437 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRAP04437 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.15■□□□□ 0.18
TCRAP04437 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRAP04437 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TCRAP04437 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TCRAP04437 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TCRAP04437 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCRAP04437 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.15■□□□□ 0.18
TCRAP04437 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
TCRAP04437 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TCRAP04437 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRAP04437 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRAP04437 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.14■□□□□ 0.17
TCRAP04437 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.14■□□□□ 0.17
TCRAP04437 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 AL033527.3-201ENST00000566366 1196 ntBASIC16.14■□□□□ 0.17
TCRAP04437 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TCRAP04437 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCRAP04437 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TCRAP04437 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRAP04437 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TCRAP04437 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TCRAP04437 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRAP04437 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.13■□□□□ 0.17
TCRAP04437 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRAP04437 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TCRAP04437 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.13■□□□□ 0.17
TCRAP04437 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TCRAP04437 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TCRAP04437 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCRAP04437 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TCRAP04437 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRAP04437 AC241377.3-202ENST00000626088 1088 ntBASIC16.12■□□□□ 0.17
TCRAP04437 AC241585.3-202ENST00000628937 1088 ntBASIC16.12■□□□□ 0.17
TCRAP04437 AC245100.8-202ENST00000629247 1058 ntBASIC16.12■□□□□ 0.17
TCRAP04437 AC068587.7-201ENST00000641602 218 ntBASIC16.12■□□□□ 0.17
TCRAP04437 AC133637.1-201ENST00000624115 1537 ntBASIC16.12■□□□□ 0.17
TCRAP04437 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.12■□□□□ 0.17
TCRAP04437 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TCRAP04437 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCRAP04437 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms