Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HCN1O60741 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HCN1O60741 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.82■□□□□ 0.76
HCN1O60741 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.82■□□□□ 0.76
HCN1O60741 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.82■□□□□ 0.76
HCN1O60741 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HCN1O60741 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
HCN1O60741 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.81■□□□□ 0.76
HCN1O60741 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.81■□□□□ 0.76
HCN1O60741 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HCN1O60741 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HCN1O60741 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HCN1O60741 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HCN1O60741 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.8■□□□□ 0.76
HCN1O60741 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HCN1O60741 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HCN1O60741 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.8■□□□□ 0.76
HCN1O60741 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.8■□□□□ 0.76
HCN1O60741 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.8■□□□□ 0.76
HCN1O60741 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.8■□□□□ 0.76
HCN1O60741 AL031602.1-201ENST00000633169 911 ntBASIC19.8■□□□□ 0.76
HCN1O60741 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.8■□□□□ 0.76
HCN1O60741 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.8■□□□□ 0.76
HCN1O60741 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HCN1O60741 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
HCN1O60741 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.79■□□□□ 0.76
HCN1O60741 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.79■□□□□ 0.76
HCN1O60741 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
HCN1O60741 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.79■□□□□ 0.76
HCN1O60741 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.79■□□□□ 0.76
HCN1O60741 AC010141.3-201ENST00000456659 717 ntBASIC19.79■□□□□ 0.76
HCN1O60741 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.79■□□□□ 0.76
HCN1O60741 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.79■□□□□ 0.76
HCN1O60741 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HCN1O60741 LINC02228-203ENST00000641970 1355 ntBASIC19.79■□□□□ 0.76
HCN1O60741 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HCN1O60741 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HCN1O60741 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.79■□□□□ 0.76
HCN1O60741 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.78■□□□□ 0.76
HCN1O60741 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.78■□□□□ 0.76
HCN1O60741 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
HCN1O60741 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.78■□□□□ 0.76
HCN1O60741 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.78■□□□□ 0.76
HCN1O60741 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.78■□□□□ 0.76
HCN1O60741 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HCN1O60741 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HCN1O60741 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.78■□□□□ 0.76
HCN1O60741 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HCN1O60741 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HCN1O60741 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.78■□□□□ 0.76
HCN1O60741 FBXW4P1-201ENST00000426721 2239 ntBASIC19.78■□□□□ 0.76
HCN1O60741 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.77■□□□□ 0.76
HCN1O60741 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN1O60741 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.77■□□□□ 0.76
HCN1O60741 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN1O60741 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.77■□□□□ 0.76
HCN1O60741 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.77■□□□□ 0.76
HCN1O60741 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.77■□□□□ 0.76
HCN1O60741 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN1O60741 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.77■□□□□ 0.76
HCN1O60741 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN1O60741 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN1O60741 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
HCN1O60741 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.76■□□□□ 0.75
HCN1O60741 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms