Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PHGDHO43175 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.13■□□□□ 0.97
PHGDHO43175 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PHGDHO43175 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
PHGDHO43175 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PHGDHO43175 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PHGDHO43175 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PHGDHO43175 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.12■□□□□ 0.97
PHGDHO43175 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.12■□□□□ 0.97
PHGDHO43175 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHGDHO43175 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.12■□□□□ 0.97
PHGDHO43175 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHGDHO43175 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.12■□□□□ 0.97
PHGDHO43175 AL034346.1-201ENST00000568244 1277 ntBASIC21.12■□□□□ 0.97
PHGDHO43175 MIR4767-201ENST00000582827 78 ntBASIC21.12■□□□□ 0.97
PHGDHO43175 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
PHGDHO43175 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.12■□□□□ 0.97
PHGDHO43175 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHGDHO43175 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.12■□□□□ 0.97
PHGDHO43175 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.12■□□□□ 0.97
PHGDHO43175 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHGDHO43175 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHGDHO43175 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PHGDHO43175 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PHGDHO43175 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PHGDHO43175 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.11■□□□□ 0.97
PHGDHO43175 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PHGDHO43175 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.11■□□□□ 0.97
PHGDHO43175 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
PHGDHO43175 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PHGDHO43175 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHGDHO43175 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHGDHO43175 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.1■□□□□ 0.97
PHGDHO43175 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PHGDHO43175 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHGDHO43175 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHGDHO43175 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHGDHO43175 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHGDHO43175 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHGDHO43175 UNC93B3-201ENST00000308076 687 ntBASIC21.1■□□□□ 0.97
PHGDHO43175 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.1■□□□□ 0.97
PHGDHO43175 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.1■□□□□ 0.97
PHGDHO43175 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PHGDHO43175 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.1■□□□□ 0.97
PHGDHO43175 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.1■□□□□ 0.97
PHGDHO43175 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PHGDHO43175 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PHGDHO43175 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.09■□□□□ 0.97
PHGDHO43175 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.09■□□□□ 0.97
PHGDHO43175 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHGDHO43175 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PHGDHO43175 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.08■□□□□ 0.97
PHGDHO43175 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHGDHO43175 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.08■□□□□ 0.97
PHGDHO43175 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PHGDHO43175 AC131212.1-201ENST00000613771 668 ntBASIC21.08■□□□□ 0.97
PHGDHO43175 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.08■□□□□ 0.97
PHGDHO43175 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.08■□□□□ 0.97
PHGDHO43175 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PHGDHO43175 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PHGDHO43175 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHGDHO43175 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHGDHO43175 BX842568.3-201ENST00000418104 571 ntBASIC21.07■□□□□ 0.96
PHGDHO43175 AC024257.2-201ENST00000549699 147 ntBASIC21.07■□□□□ 0.96
PHGDHO43175 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.07■□□□□ 0.96
PHGDHO43175 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PHGDHO43175 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHGDHO43175 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHGDHO43175 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms