Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 AC133637.1-201ENST00000624115 1537 ntBASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
DDX49Q9Y6V7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX49Q9Y6V7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
DDX49Q9Y6V7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
DDX49Q9Y6V7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
DDX49Q9Y6V7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 MIR6084-201ENST00000622012 110 ntBASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.45■■□□□ 1.66
DDX49Q9Y6V7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
DDX49Q9Y6V7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
DDX49Q9Y6V7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
DDX49Q9Y6V7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DDX49Q9Y6V7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX49Q9Y6V7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 AL499627.2-201ENST00000606283 725 ntBASIC25.39■■□□□ 1.66
DDX49Q9Y6V7 IKBKGP1-201ENST00000612193 1073 ntBASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms