Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MRPS28Q9Y2Q9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.33■□□□□ 0.53
MRPS28Q9Y2Q9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.33■□□□□ 0.53
MRPS28Q9Y2Q9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MRPS28Q9Y2Q9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
MRPS28Q9Y2Q9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.33■□□□□ 0.53
MRPS28Q9Y2Q9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 MIR3181-201ENST00000578512 73 ntBASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.33■□□□□ 0.52
MRPS28Q9Y2Q9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MRPS28Q9Y2Q9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 AC010141.3-201ENST00000456659 717 ntBASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MRPS28Q9Y2Q9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MRPS28Q9Y2Q9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.29■□□□□ 0.52
MRPS28Q9Y2Q9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.28■□□□□ 0.52
MRPS28Q9Y2Q9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms