Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.67■■□□□ 1.06
CHMP2BQ9UQN3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHMP2BQ9UQN3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 OXCT2P1-201ENST00000447263 1535 ntBASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CHMP2BQ9UQN3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHMP2BQ9UQN3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP2BQ9UQN3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP2BQ9UQN3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 SYT6-210ENST00000641643 1587 ntBASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 AL356441.2-201ENST00000443009 864 ntBASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 MIR4466-201ENST00000606121 54 ntBASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHMP2BQ9UQN3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms