Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOX17Q9H6I2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 AC027612.3-201ENST00000413684 1047 ntBASIC20.62■□□□□ 0.89
SOX17Q9H6I2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 AC104564.3-201ENST00000582367 638 ntBASIC20.62■□□□□ 0.89
SOX17Q9H6I2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.62■□□□□ 0.89
SOX17Q9H6I2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 AC073130.3-201ENST00000624389 2278 ntBASIC20.61■□□□□ 0.89
SOX17Q9H6I2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.61■□□□□ 0.89
SOX17Q9H6I2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SOX17Q9H6I2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 AC087239.1-201ENST00000622671 572 ntBASIC20.59■□□□□ 0.89
SOX17Q9H6I2 AC068587.7-201ENST00000641602 218 ntBASIC20.59■□□□□ 0.89
SOX17Q9H6I2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SOX17Q9H6I2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX17Q9H6I2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SOX17Q9H6I2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SOX17Q9H6I2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.58■□□□□ 0.89
SOX17Q9H6I2 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.58■□□□□ 0.89
SOX17Q9H6I2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.58■□□□□ 0.89
SOX17Q9H6I2 AC034268.1-201ENST00000441047 882 ntBASIC20.58■□□□□ 0.89
SOX17Q9H6I2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SOX17Q9H6I2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.57■□□□□ 0.88
SOX17Q9H6I2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SOX17Q9H6I2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms