Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.19■■□□□ 1.14
RNF38Q9H0F5 AC010141.2-201ENST00000452426 721 ntBASIC22.19■■□□□ 1.14
RNF38Q9H0F5 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.19■■□□□ 1.14
RNF38Q9H0F5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF38Q9H0F5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 DUX4L16-201ENST00000555130 1264 ntBASIC22.18■■□□□ 1.14
RNF38Q9H0F5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RNF38Q9H0F5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 AC053503.5-201ENST00000601508 636 ntBASIC22.17■■□□□ 1.14
RNF38Q9H0F5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 MYCNOS-205ENST00000641950 531 ntBASIC22.17■■□□□ 1.14
RNF38Q9H0F5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF38Q9H0F5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF38Q9H0F5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 AC127496.7-201ENST00000625110 1798 ntBASIC22.15■■□□□ 1.14
RNF38Q9H0F5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
RNF38Q9H0F5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
RNF38Q9H0F5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
RNF38Q9H0F5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 KRT18P20-201ENST00000548986 1279 ntBASIC22.14■■□□□ 1.13
RNF38Q9H0F5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
RNF38Q9H0F5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 AC092053.2-201ENST00000640557 1818 ntBASIC22.13■■□□□ 1.13
RNF38Q9H0F5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.13■■□□□ 1.13
RNF38Q9H0F5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms