Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST3H2BBQ8N257 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST3H2BBQ8N257 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST3H2BBQ8N257 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST3H2BBQ8N257 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST3H2BBQ8N257 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST3H2BBQ8N257 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST3H2BBQ8N257 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HIST3H2BBQ8N257 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST3H2BBQ8N257 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST3H2BBQ8N257 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
HIST3H2BBQ8N257 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST3H2BBQ8N257 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 AC144652.1-201ENST00000609974 1624 ntBASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST3H2BBQ8N257 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 AC108673.1-201ENST00000510422 1159 ntBASIC16■□□□□ 0.15
HIST3H2BBQ8N257 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HIST3H2BBQ8N257 AC120498.9-201ENST00000339021 3867 ntBASIC16■□□□□ 0.15
HIST3H2BBQ8N257 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST3H2BBQ8N257 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST3H2BBQ8N257 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 NOC2LP1-202ENST00000452600 2235 ntBASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 AC007613.1-201ENST00000572811 2597 ntBASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST3H2BBQ8N257 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms