Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 AC096631.2-201ENST00000436136 790 ntBASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC00346Q8IVM7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00346Q8IVM7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00346Q8IVM7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00346Q8IVM7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00346Q8IVM7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
LINC00346Q8IVM7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00346Q8IVM7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.83■□□□□ 0.61
LINC00346Q8IVM7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 AC126544.1-201ENST00000580842 1059 ntBASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 AC104564.3-201ENST00000582367 638 ntBASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 AC233992.3-201ENST00000607491 485 ntBASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00346Q8IVM7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 AC008764.7-201ENST00000593779 1081 ntBASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 AF106564.1-201ENST00000607058 2553 ntBASIC18.82■□□□□ 0.6
LINC00346Q8IVM7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 PBX2P1-201ENST00000493219 1291 ntBASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 AL034346.1-201ENST00000568244 1277 ntBASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC00346Q8IVM7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms