Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 SYT6-210ENST00000641643 1587 ntBASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 AL512631.2-201ENST00000604634 923 ntBASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 AL138724.1-201ENST00000606771 1088 ntBASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
MRPL55Q7Z7F7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
MRPL55Q7Z7F7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 AC010141.3-201ENST00000456659 717 ntBASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 AC244015.2-201ENST00000616358 1861 ntBASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
MRPL55Q7Z7F7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
MRPL55Q7Z7F7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms