Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FAM27BQ5VT28 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 AC005224.4-201ENST00000583262 1652 ntBASIC18.71■□□□□ 0.59
FAM27BQ5VT28 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM27BQ5VT28 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
FAM27BQ5VT28 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
FAM27BQ5VT28 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM27BQ5VT28 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 AC055733.4-201ENST00000638462 1354 ntBASIC18.69■□□□□ 0.58
FAM27BQ5VT28 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FAM27BQ5VT28 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FAM27BQ5VT28 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.67■□□□□ 0.58
FAM27BQ5VT28 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.67■□□□□ 0.58
FAM27BQ5VT28 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM27BQ5VT28 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms