Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CENPAP49450 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.23■□□□□ 0.67
CENPAP49450 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CENPAP49450 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.23■□□□□ 0.67
CENPAP49450 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CENPAP49450 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.23■□□□□ 0.67
CENPAP49450 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CENPAP49450 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.23■□□□□ 0.67
CENPAP49450 AC087239.1-201ENST00000622671 572 ntBASIC19.23■□□□□ 0.67
CENPAP49450 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.23■□□□□ 0.67
CENPAP49450 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CENPAP49450 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CENPAP49450 FAM99A-202ENST00000538190 1989 ntBASIC19.23■□□□□ 0.67
CENPAP49450 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CENPAP49450 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CENPAP49450 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CENPAP49450 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.22■□□□□ 0.67
CENPAP49450 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CENPAP49450 AC010542.4-201ENST00000563151 1910 ntBASIC19.22■□□□□ 0.67
CENPAP49450 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CENPAP49450 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPAP49450 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CENPAP49450 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPAP49450 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPAP49450 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.22■□□□□ 0.67
CENPAP49450 AC244015.2-201ENST00000616358 1861 ntBASIC19.22■□□□□ 0.67
CENPAP49450 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CENPAP49450 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CENPAP49450 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CENPAP49450 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
CENPAP49450 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CENPAP49450 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPAP49450 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.21■□□□□ 0.67
CENPAP49450 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CENPAP49450 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.21■□□□□ 0.67
CENPAP49450 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CENPAP49450 OR7E47P-201ENST00000546390 1422 ntBASIC19.21■□□□□ 0.67
CENPAP49450 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.21■□□□□ 0.67
CENPAP49450 AL137060.1-201ENST00000618151 2648 ntBASIC19.21■□□□□ 0.67
CENPAP49450 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.21■□□□□ 0.67
CENPAP49450 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPAP49450 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPAP49450 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CENPAP49450 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CENPAP49450 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CENPAP49450 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CENPAP49450 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.2■□□□□ 0.66
CENPAP49450 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.2■□□□□ 0.66
CENPAP49450 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.2■□□□□ 0.66
CENPAP49450 MIR4466-201ENST00000606121 54 ntBASIC19.2■□□□□ 0.66
CENPAP49450 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.2■□□□□ 0.66
CENPAP49450 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CENPAP49450 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CENPAP49450 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPAP49450 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.19■□□□□ 0.66
CENPAP49450 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.19■□□□□ 0.66
CENPAP49450 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 OR2I1P-207ENST00000453522 948 ntBASIC19.19■□□□□ 0.66
CENPAP49450 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 DUX4L19-201ENST00000557448 1267 ntBASIC19.19■□□□□ 0.66
CENPAP49450 AC010525.1-201ENST00000585559 441 ntBASIC19.19■□□□□ 0.66
CENPAP49450 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
CENPAP49450 AL121603.2-201ENST00000557373 2117 ntBASIC19.19■□□□□ 0.66
CENPAP49450 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPAP49450 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms