Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAPDHP04406 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAPDHP04406 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAPDHP04406 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.79■□□□□ 0.44
GAPDHP04406 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAPDHP04406 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.79■□□□□ 0.44
GAPDHP04406 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GAPDHP04406 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.79■□□□□ 0.44
GAPDHP04406 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAPDHP04406 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.79■□□□□ 0.44
GAPDHP04406 AC136469.2-201ENST00000623944 1028 ntBASIC17.79■□□□□ 0.44
GAPDHP04406 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GAPDHP04406 LINC01960-201ENST00000563759 1884 ntBASIC17.79■□□□□ 0.44
GAPDHP04406 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
GAPDHP04406 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
GAPDHP04406 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GAPDHP04406 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.78■□□□□ 0.44
GAPDHP04406 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.78■□□□□ 0.44
GAPDHP04406 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GAPDHP04406 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GAPDHP04406 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.78■□□□□ 0.44
GAPDHP04406 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.78■□□□□ 0.44
GAPDHP04406 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GAPDHP04406 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.78■□□□□ 0.44
GAPDHP04406 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GAPDHP04406 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GAPDHP04406 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.77■□□□□ 0.44
GAPDHP04406 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 OR2I1P-207ENST00000453522 948 ntBASIC17.77■□□□□ 0.44
GAPDHP04406 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.77■□□□□ 0.44
GAPDHP04406 AL136162.1-201ENST00000607711 1078 ntBASIC17.77■□□□□ 0.44
GAPDHP04406 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GAPDHP04406 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GAPDHP04406 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GAPDHP04406 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GAPDHP04406 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GAPDHP04406 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.77■□□□□ 0.43
GAPDHP04406 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GAPDHP04406 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GAPDHP04406 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GAPDHP04406 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GAPDHP04406 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAPDHP04406 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.76■□□□□ 0.43
GAPDHP04406 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GAPDHP04406 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GAPDHP04406 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.76■□□□□ 0.43
GAPDHP04406 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAPDHP04406 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAPDHP04406 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.76■□□□□ 0.43
GAPDHP04406 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAPDHP04406 AC068587.7-201ENST00000641602 218 ntBASIC17.76■□□□□ 0.43
GAPDHP04406 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.76■□□□□ 0.43
GAPDHP04406 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.76■□□□□ 0.43
GAPDHP04406 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GAPDHP04406 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GAPDHP04406 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GAPDHP04406 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.75■□□□□ 0.43
GAPDHP04406 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GAPDHP04406 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAPDHP04406 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GAPDHP04406 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.75■□□□□ 0.43
GAPDHP04406 AC096631.2-201ENST00000436136 790 ntBASIC17.75■□□□□ 0.43
GAPDHP04406 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.75■□□□□ 0.43
GAPDHP04406 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.75■□□□□ 0.43
GAPDHP04406 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAPDHP04406 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.75■□□□□ 0.43
GAPDHP04406 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GAPDHP04406 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GAPDHP04406 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GAPDHP04406 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.75■□□□□ 0.43
GAPDHP04406 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.74■□□□□ 0.43
GAPDHP04406 AC135279.3-201ENST00000610945 1311 ntBASIC17.74■□□□□ 0.43
GAPDHP04406 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAPDHP04406 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
GAPDHP04406 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GAPDHP04406 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GAPDHP04406 AL157384.1-201ENST00000445995 2473 ntBASIC17.74■□□□□ 0.43
GAPDHP04406 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GAPDHP04406 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GAPDHP04406 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GAPDHP04406 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.74■□□□□ 0.43
GAPDHP04406 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.74■□□□□ 0.43
GAPDHP04406 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms