Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-2O95096 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-2O95096 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NKX2-2O95096 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.75■□□□□ 0.75
NKX2-2O95096 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NKX2-2O95096 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-2O95096 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.75■□□□□ 0.75
NKX2-2O95096 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-2O95096 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NKX2-2O95096 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NKX2-2O95096 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
NKX2-2O95096 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX2-2O95096 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-2O95096 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.74■□□□□ 0.75
NKX2-2O95096 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-2O95096 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NKX2-2O95096 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NKX2-2O95096 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.74■□□□□ 0.75
NKX2-2O95096 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NKX2-2O95096 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NKX2-2O95096 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-2O95096 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NKX2-2O95096 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NKX2-2O95096 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.73■□□□□ 0.75
NKX2-2O95096 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NKX2-2O95096 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.73■□□□□ 0.75
NKX2-2O95096 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NKX2-2O95096 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-2O95096 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-2O95096 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.72■□□□□ 0.75
NKX2-2O95096 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.72■□□□□ 0.75
NKX2-2O95096 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.72■□□□□ 0.75
NKX2-2O95096 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-2O95096 TPRG1LP1-201ENST00000598702 760 ntBASIC19.72■□□□□ 0.75
NKX2-2O95096 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.72■□□□□ 0.75
NKX2-2O95096 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NKX2-2O95096 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NKX2-2O95096 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
NKX2-2O95096 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.71■□□□□ 0.75
NKX2-2O95096 MIR6084-201ENST00000622012 110 ntBASIC19.71■□□□□ 0.75
NKX2-2O95096 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.71■□□□□ 0.75
NKX2-2O95096 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NKX2-2O95096 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-2O95096 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-2O95096 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-2O95096 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-2O95096 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.7■□□□□ 0.74
NKX2-2O95096 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-2O95096 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-2O95096 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.7■□□□□ 0.74
NKX2-2O95096 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.7■□□□□ 0.74
NKX2-2O95096 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.7■□□□□ 0.74
NKX2-2O95096 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NKX2-2O95096 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NKX2-2O95096 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.7■□□□□ 0.74
NKX2-2O95096 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NKX2-2O95096 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NKX2-2O95096 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 CLDN5-201ENST00000403084 2357 ntBASIC19.69■□□□□ 0.74
NKX2-2O95096 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NKX2-2O95096 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.69■□□□□ 0.74
NKX2-2O95096 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NKX2-2O95096 AC027612.3-201ENST00000413684 1047 ntBASIC19.69■□□□□ 0.74
NKX2-2O95096 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.69■□□□□ 0.74
NKX2-2O95096 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
NKX2-2O95096 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms