Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CSNK1G3Q9Y6M4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 AC007322.1-201ENST00000426983 750 ntBASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CSNK1G3Q9Y6M4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 AC010141.2-201ENST00000452426 721 ntBASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 AL121832.2-201ENST00000610979 668 ntBASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.96■□□□□ 0.95
CSNK1G3Q9Y6M4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 AL355802.2-201ENST00000402069 882 ntBASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CSNK1G3Q9Y6M4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSNK1G3Q9Y6M4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.93■□□□□ 0.94
CSNK1G3Q9Y6M4 LINC00526-201ENST00000581067 1875 ntBASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 AC005181.1-201ENST00000604782 1256 ntBASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.92■□□□□ 0.94
CSNK1G3Q9Y6M4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 AC083906.2-201ENST00000511578 360 ntBASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 AC142086.2-201ENST00000569753 217 ntBASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 AL050303.2-201ENST00000619798 666 ntBASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.91■□□□□ 0.94
CSNK1G3Q9Y6M4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSNK1G3Q9Y6M4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms