Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHB9Q9Y5E1 AP004607.7-201ENST00000527152 1677 ntBASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHB9Q9Y5E1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB9Q9Y5E1 AL117328.2-201ENST00000624617 1940 ntBASIC21.7■■□□□ 1.07
PCDHB9Q9Y5E1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.7■■□□□ 1.07
PCDHB9Q9Y5E1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.7■■□□□ 1.07
PCDHB9Q9Y5E1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 AC006015.1-201ENST00000429970 570 ntBASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB9Q9Y5E1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 AC026185.1-201ENST00000445748 174 ntBASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 AC073111.5-205ENST00000641717 521 ntBASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB9Q9Y5E1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 CDCA4P2-201ENST00000441182 718 ntBASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB9Q9Y5E1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB9Q9Y5E1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms