Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMCO4Q9NRQ5 HCG11-201ENST00000411553 5696 ntBASIC16.83■□□□□ 0.29
SMCO4Q9NRQ5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
SMCO4Q9NRQ5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMCO4Q9NRQ5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.82■□□□□ 0.28
SMCO4Q9NRQ5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SMCO4Q9NRQ5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 CAHM-201ENST00000604200 896 ntBASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.8■□□□□ 0.28
SMCO4Q9NRQ5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMCO4Q9NRQ5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms