Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NEDD4LQ96PU5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.83■□□□□ 0.61
NEDD4LQ96PU5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 AC087289.5-201ENST00000586076 3175 ntBASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4LQ96PU5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4LQ96PU5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 YBX1P4-201ENST00000392794 808 ntBASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 AC144652.1-201ENST00000609974 1624 ntBASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
NEDD4LQ96PU5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 SNX5-217ENST00000606557 1087 ntBASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 AC012354.3-201ENST00000623734 483 ntBASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.8■□□□□ 0.6
NEDD4LQ96PU5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.79■□□□□ 0.6
NEDD4LQ96PU5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
NEDD4LQ96PU5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms