Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC11.79□□□□□ -0.52
SPTSSBQ8NFR3 OR6D1P-203ENST00000641209 4860 ntBASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SPTSSBQ8NFR3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
SPTSSBQ8NFR3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
SPTSSBQ8NFR3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SPTSSBQ8NFR3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SPTSSBQ8NFR3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.77□□□□□ -0.52
SPTSSBQ8NFR3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SPTSSBQ8NFR3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SPTSSBQ8NFR3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 LINC00273-201ENST00000539813 1452 ntBASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SPTSSBQ8NFR3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms