Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NFE4Q86UQ8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 PBX2P1-201ENST00000493219 1291 ntBASIC15.22■□□□□ 0.03
NFE4Q86UQ8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 AC244015.2-201ENST00000616358 1861 ntBASIC15.22■□□□□ 0.03
NFE4Q86UQ8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NFE4Q86UQ8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 SYT6-210ENST00000641643 1587 ntBASIC15.21■□□□□ 0.03
NFE4Q86UQ8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 AC106739.1-201ENST00000617035 715 ntBASIC15.21■□□□□ 0.03
NFE4Q86UQ8 AC110285.6-201ENST00000617652 491 ntBASIC15.21■□□□□ 0.03
NFE4Q86UQ8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NFE4Q86UQ8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NFE4Q86UQ8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.21■□□□□ 0.02
NFE4Q86UQ8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NFE4Q86UQ8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
NFE4Q86UQ8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NFE4Q86UQ8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 AC135279.3-201ENST00000610945 1311 ntBASIC15.2■□□□□ 0.02
NFE4Q86UQ8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 UNC93B3-201ENST00000308076 687 ntBASIC15.2■□□□□ 0.02
NFE4Q86UQ8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 AL136162.1-201ENST00000607711 1078 ntBASIC15.2■□□□□ 0.02
NFE4Q86UQ8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NFE4Q86UQ8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 AL138724.1-201ENST00000606771 1088 ntBASIC15.19■□□□□ 0.02
NFE4Q86UQ8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NFE4Q86UQ8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.18■□□□□ 0.02
NFE4Q86UQ8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms