Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.17■■□□□ 1.14
FOXR1Q6PIV2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 SUDS3P1-201ENST00000505831 966 ntBASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 AL031432.3-201ENST00000607698 485 ntBASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 AL355001.2-201ENST00000620617 1191 ntBASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXR1Q6PIV2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXR1Q6PIV2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.14■■□□□ 1.14
FOXR1Q6PIV2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.14■■□□□ 1.14
FOXR1Q6PIV2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
FOXR1Q6PIV2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 EDA-201ENST00000338901 1233 ntBASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 AC105265.2-201ENST00000467189 838 ntBASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXR1Q6PIV2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXR1Q6PIV2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXR1Q6PIV2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 AC026271.2-201ENST00000428091 497 ntBASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 AF213884.3-201ENST00000563833 479 ntBASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 AC087742.1-201ENST00000575880 1738 ntBASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 AL020996.1-203ENST00000536896 2307 ntBASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
FOXR1Q6PIV2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXR1Q6PIV2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms