Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.57■■□□□ 1.04
LIMK2P53671 AC079089.2-201ENST00000531211 1277 ntBASIC21.57■■□□□ 1.04
LIMK2P53671 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.57■■□□□ 1.04
LIMK2P53671 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.57■■□□□ 1.04
LIMK2P53671 AC087623.3-201ENST00000607047 1098 ntBASIC21.57■■□□□ 1.04
LIMK2P53671 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.57■■□□□ 1.04
LIMK2P53671 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LIMK2P53671 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LIMK2P53671 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LIMK2P53671 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.57■■□□□ 1.04
LIMK2P53671 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LIMK2P53671 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.57■■□□□ 1.04
LIMK2P53671 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.56■■□□□ 1.04
LIMK2P53671 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.56■■□□□ 1.04
LIMK2P53671 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.56■■□□□ 1.04
LIMK2P53671 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LIMK2P53671 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.56■■□□□ 1.04
LIMK2P53671 AC126544.1-201ENST00000580842 1059 ntBASIC21.56■■□□□ 1.04
LIMK2P53671 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.56■■□□□ 1.04
LIMK2P53671 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LIMK2P53671 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.56■■□□□ 1.04
LIMK2P53671 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.56■■□□□ 1.04
LIMK2P53671 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LIMK2P53671 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LIMK2P53671 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LIMK2P53671 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.55■■□□□ 1.04
LIMK2P53671 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LIMK2P53671 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LIMK2P53671 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LIMK2P53671 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.55■■□□□ 1.04
LIMK2P53671 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.55■■□□□ 1.04
LIMK2P53671 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.55■■□□□ 1.04
LIMK2P53671 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LIMK2P53671 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LIMK2P53671 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LIMK2P53671 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.55■■□□□ 1.04
LIMK2P53671 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LIMK2P53671 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
LIMK2P53671 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.54■■□□□ 1.04
LIMK2P53671 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LIMK2P53671 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.54■■□□□ 1.04
LIMK2P53671 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LIMK2P53671 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.54■■□□□ 1.04
LIMK2P53671 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LIMK2P53671 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
LIMK2P53671 SLC47A1P1-202ENST00000449666 945 ntBASIC21.53■■□□□ 1.04
LIMK2P53671 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LIMK2P53671 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LIMK2P53671 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LIMK2P53671 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.53■■□□□ 1.04
LIMK2P53671 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LIMK2P53671 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LIMK2P53671 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.53■■□□□ 1.04
LIMK2P53671 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LIMK2P53671 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.53■■□□□ 1.04
LIMK2P53671 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
LIMK2P53671 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LIMK2P53671 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LIMK2P53671 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.52■■□□□ 1.04
LIMK2P53671 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LIMK2P53671 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.52■■□□□ 1.04
LIMK2P53671 OR2I1P-207ENST00000453522 948 ntBASIC21.52■■□□□ 1.04
LIMK2P53671 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.52■■□□□ 1.03
LIMK2P53671 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LIMK2P53671 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LIMK2P53671 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.51■■□□□ 1.03
LIMK2P53671 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.51■■□□□ 1.03
LIMK2P53671 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LIMK2P53671 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.51■■□□□ 1.03
LIMK2P53671 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.51■■□□□ 1.03
LIMK2P53671 AC068587.7-201ENST00000641602 218 ntBASIC21.51■■□□□ 1.03
LIMK2P53671 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LIMK2P53671 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LIMK2P53671 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LIMK2P53671 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LIMK2P53671 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LIMK2P53671 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.5■■□□□ 1.03
LIMK2P53671 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LIMK2P53671 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LIMK2P53671 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms