Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 SRT1YMR101C 1032 nt3.31□□□□□ -1.88
TY1B-JR2P47100 ENT1YDL161W 1365 nt3.31□□□□□ -1.88
TY1B-JR2P47100 SPO14YKR031C 5052 nt3.31□□□□□ -1.88
TY1B-JR2P47100 RPC17YJL011C 486 nt3.3□□□□□ -1.88
TY1B-JR2P47100 FAR1YJL157C 2493 nt3.3□□□□□ -1.88
TY1B-JR2P47100 CST9YLR394W 1449 nt3.3□□□□□ -1.88
TY1B-JR2P47100 PPT2YPL148C 522 nt3.3□□□□□ -1.88
TY1B-JR2P47100 CIN1YOR349W 3045 nt3.29□□□□□ -1.88
TY1B-JR2P47100 YJR098CYJR098C 1971 nt3.29□□□□□ -1.88
TY1B-JR2P47100 VFA1YER128W 612 nt3.29□□□□□ -1.88
TY1B-JR2P47100 ECO1YFR027W 846 nt3.29□□□□□ -1.88
TY1B-JR2P47100 YAL059C-AYAL059C-A 423 nt3.29□□□□□ -1.88
TY1B-JR2P47100 SVL3YPL032C 2478 nt3.29□□□□□ -1.88
TY1B-JR2P47100 VPS13YLL040C 9435 nt3.29□□□□□ -1.88
TY1B-JR2P47100 ATG1YGL180W 2694 nt3.28□□□□□ -1.88
TY1B-JR2P47100 GAB1YLR459W 1185 nt3.28□□□□□ -1.88
TY1B-JR2P47100 NOP13YNL175C 1212 nt3.28□□□□□ -1.88
TY1B-JR2P47100 IRC8YJL051W 2469 nt3.28□□□□□ -1.88
TY1B-JR2P47100 PEX8YGR077C 1770 nt3.28□□□□□ -1.88
TY1B-JR2P47100 SSD1YDR293C 3753 nt3.28□□□□□ -1.89
TY1B-JR2P47100 RRP5YMR229C 5190 nt3.27□□□□□ -1.89
TY1B-JR2P47100 MNR2YKL064W 2910 nt3.27□□□□□ -1.89
TY1B-JR2P47100 DIS3YOL021C 3006 nt3.27□□□□□ -1.89
TY1B-JR2P47100 DUG2YBR281C 2637 nt3.27□□□□□ -1.89
TY1B-JR2P47100 SPO73YER046W 432 nt3.27□□□□□ -1.89
TY1B-JR2P47100 YKR073CYKR073C 321 nt3.27□□□□□ -1.89
TY1B-JR2P47100 ORM2YLR350W 651 nt3.27□□□□□ -1.89
TY1B-JR2P47100 SCD6YPR129W 1050 nt3.27□□□□□ -1.89
TY1B-JR2P47100 YKR023WYKR023W 1593 nt3.27□□□□□ -1.89
TY1B-JR2P47100 NUP159YIL115C 4383 nt3.26□□□□□ -1.89
TY1B-JR2P47100 ERG25YGR060W 930 nt3.26□□□□□ -1.89
TY1B-JR2P47100 GEP4YHR100C 558 nt3.26□□□□□ -1.89
TY1B-JR2P47100 YIR020W-AYIR020W-A 243 nt3.26□□□□□ -1.89
TY1B-JR2P47100 MET14YKL001C 609 nt3.26□□□□□ -1.89
TY1B-JR2P47100 NEO1YIL048W 3456 nt3.26□□□□□ -1.89
TY1B-JR2P47100 CDH1YGL003C 1701 nt3.26□□□□□ -1.89
TY1B-JR2P47100 ROM1YGR070W 3468 nt3.26□□□□□ -1.89
TY1B-JR2P47100 BET1YIL004C 429 nt3.25□□□□□ -1.89
TY1B-JR2P47100 TRI1YMR233W 681 nt3.25□□□□□ -1.89
TY1B-JR2P47100 TMC1YOR052C 453 nt3.25□□□□□ -1.89
TY1B-JR2P47100 NUP100YKL068W 2880 nt3.25□□□□□ -1.89
TY1B-JR2P47100 ESL1YIL151C 3357 nt3.25□□□□□ -1.89
TY1B-JR2P47100 TFC3YAL001C 3483 nt3.25□□□□□ -1.89
TY1B-JR2P47100 ATG17YLR423C 1254 nt3.25□□□□□ -1.89
TY1B-JR2P47100 SLM2YNL047C 1971 nt3.25□□□□□ -1.89
TY1B-JR2P47100 VAC14YLR386W 2643 nt3.24□□□□□ -1.89
TY1B-JR2P47100 SIP3YNL257C 3690 nt3.24□□□□□ -1.89
TY1B-JR2P47100 SSK2YNR031C 4740 nt3.24□□□□□ -1.89
TY1B-JR2P47100 MPP10YJR002W 1782 nt3.24□□□□□ -1.89
TY1B-JR2P47100 YER079C-AYER079C-A 339 nt3.24□□□□□ -1.89
TY1B-JR2P47100 TAF4YMR005W 1167 nt3.24□□□□□ -1.89
TY1B-JR2P47100 SAS5YOR213C 747 nt3.24□□□□□ -1.89
TY1B-JR2P47100 MSS18YPR134W 807 nt3.24□□□□□ -1.89
TY1B-JR2P47100 HPR1YDR138W 2259 nt3.24□□□□□ -1.89
TY1B-JR2P47100 DOA4YDR069C 2781 nt3.23□□□□□ -1.89
TY1B-JR2P47100 BNR1YIL159W 4128 nt3.23□□□□□ -1.89
TY1B-JR2P47100 SYS1YJL004C 612 nt3.23□□□□□ -1.89
TY1B-JR2P47100 RAS1YOR101W 930 nt3.23□□□□□ -1.89
TY1B-JR2P47100 SRP68YPL243W 1800 nt3.23□□□□□ -1.89
TY1B-JR2P47100 YIL092WYIL092W 1902 nt3.23□□□□□ -1.89
TY1B-JR2P47100 HSH155YMR288W 2916 nt3.23□□□□□ -1.89
TY1B-JR2P47100 YOL098CYOL098C 3114 nt3.23□□□□□ -1.89
TY1B-JR2P47100 RPS23AYGR118W 438 nt3.23□□□□□ -1.89
TY1B-JR2P47100 RPS23BYPR132W 438 nt3.23□□□□□ -1.89
TY1B-JR2P47100 REV3YPL167C 4515 nt3.22□□□□□ -1.89
TY1B-JR2P47100 YDR535CYDR535C 501 nt3.22□□□□□ -1.89
TY1B-JR2P47100 RPL27AYHR010W 411 nt3.22□□□□□ -1.89
TY1B-JR2P47100 YLR122CYLR122C 378 nt3.22□□□□□ -1.89
TY1B-JR2P47100 SEG1YMR086W 2883 nt3.22□□□□□ -1.89
TY1B-JR2P47100 SFB2YNL049C 2631 nt3.22□□□□□ -1.89
TY1B-JR2P47100 ATG7YHR171W 1893 nt3.21□□□□□ -1.89
TY1B-JR2P47100 YER039C-AYER039C-A 219 nt3.21□□□□□ -1.9
TY1B-JR2P47100 SIR4YDR227W 4077 nt3.21□□□□□ -1.9
TY1B-JR2P47100 PUF6YDR496C 1971 nt3.21□□□□□ -1.9
TY1B-JR2P47100 KRE33YNL132W 3171 nt3.21□□□□□ -1.9
TY1B-JR2P47100 TAE2YPL009C 3117 nt3.21□□□□□ -1.9
TY1B-JR2P47100 FLO1YAR050W 4614 nt3.2□□□□□ -1.9
TY1B-JR2P47100 YLR125WYLR125W 411 nt3.2□□□□□ -1.9
TY1B-JR2P47100 Q0010Q0010 387 nt3.2□□□□□ -1.9
TY1B-JR2P47100 DCP2YNL118C 2913 nt3.2□□□□□ -1.9
TY1B-JR2P47100 SSN2YDR443C 4263 nt3.2□□□□□ -1.9
TY1B-JR2P47100 YBL065WYBL065W 345 nt3.2□□□□□ -1.9
TY1B-JR2P47100 snR17asnR17a 333 nt3.2□□□□□ -1.9
TY1B-JR2P47100 MF(ALPHA)1YPL187W 498 nt3.2□□□□□ -1.9
TY1B-JR2P47100 SSF2YDR312W 1362 nt3.19□□□□□ -1.9
TY1B-JR2P47100 REB1YBR049C 2433 nt3.19□□□□□ -1.9
TY1B-JR2P47100 RPO21YDL140C 5202 nt3.19□□□□□ -1.9
TY1B-JR2P47100 YBL005W-AYBL005W-A 1323 nt3.19□□□□□ -1.9
TY1B-JR2P47100 YMR046CYMR046C 1323 nt3.19□□□□□ -1.9
TY1B-JR2P47100 UNG1YML021C 1080 nt3.18□□□□□ -1.9
TY1B-JR2P47100 POL30YBR088C 777 nt3.18□□□□□ -1.9
TY1B-JR2P47100 YJL052C-AYJL052C-A 120 nt3.17□□□□□ -1.9
TY1B-JR2P47100 BUD4YJR092W 4344 nt3.17□□□□□ -1.9
TY1B-JR2P47100 SPF1YEL031W 3648 nt3.17□□□□□ -1.9
TY1B-JR2P47100 YSP2YDR326C 4317 nt3.17□□□□□ -1.9
TY1B-JR2P47100 RPL17BYJL177W 555 nt3.17□□□□□ -1.9
TY1B-JR2P47100 PST1YDR055W 1335 nt3.17□□□□□ -1.9
TY1B-JR2P47100 TAF12YDR145W 1620 nt3.16□□□□□ -1.9
TY1B-JR2P47100 YLR302CYLR302C 363 nt3.16□□□□□ -1.9
TY1B-JR2P47100 SSO2YMR183C 888 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms