RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeastyeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG1YGL180W DRS1P32892 752 aaKnown RBP11.43□□□□□ -0.58
ATG1YGL180W TFA1P36100 482 aa10.65□□□□□ -0.7
ATG1YGL180W MTC1P47018 478 aaKnown RBP10.45□□□□□ -0.74
ATG1YGL180W BFR2Q06631 534 aaKnown RBP10.29□□□□□ -0.76
ATG1YGL180W AVT3P36062 692 aa9.82□□□□□ -0.84
ATG1YGL180W RQC2Q12532 1038 aaKnown RBP9.61□□□□□ -0.87
ATG1YGL180W TAF7Q05021 590 aa9.49□□□□□ -0.89
ATG1YGL180W DIP2Q12220 943 aaPredicted RBP9.43□□□□□ -0.9
ATG1YGL180W DMA1P38823 416 aa9.1□□□□□ -0.95
ATG1YGL180W LEO1P38439 464 aa8.89□□□□□ -0.99
ATG1YGL180W RSE1Q04693 1361 aaKnown RBP8.49□□□□□ -1.05
ATG1YGL180W SAS10Q12136 610 aaPredicted RBP8.49□□□□□ -1.05
ATG1YGL180W LEU3P08638 886 aa8.48□□□□□ -1.05
ATG1YGL180W ABP1P15891 592 aaKnown RBP8.46□□□□□ -1.06
ATG1YGL180W PTP3P40048 928 aa8.42□□□□□ -1.06
ATG1YGL180W RIM101P33400 625 aa8.27□□□□□ -1.08
ATG1YGL180W SPT21P35209 758 aa8.24□□□□□ -1.09
ATG1YGL180W SSP1P38871 571 aa8.22□□□□□ -1.09
ATG1YGL180W DMA2P53924 522 aa8.22□□□□□ -1.09
ATG1YGL180W IFH1P39520 1085 aa8.15□□□□□ -1.11
ATG1YGL180W RPL17AP05740 184 aaKnown RBP8.12□□□□□ -1.11
ATG1YGL180W RPL17BP46990 184 aaKnown RBP8.12□□□□□ -1.11
ATG1YGL180W OXP1P28273 1286 aa8.1□□□□□ -1.11
ATG1YGL180W ISW2Q08773 1120 aa8.05□□□□□ -1.12
ATG1YGL180W RPG1P38249 964 aaKnown RBP8.03□□□□□ -1.12
ATG1YGL180W YLR271WQ06152 274 aa8.02□□□□□ -1.13
ATG1YGL180W RPN1P38764 993 aaKnown RBP8.01□□□□□ -1.13
ATG1YGL180W RLF2Q12495 606 aa7.98□□□□□ -1.13
ATG1YGL180W ORC1P54784 914 aaPredicted RBP7.96□□□□□ -1.14
ATG1YGL180W CKB1P43639 278 aa7.89□□□□□ -1.15
ATG1YGL180W PRI1P10363 409 aa7.85□□□□□ -1.15
ATG1YGL180W MGA2P40578 1113 aa7.85□□□□□ -1.15
ATG1YGL180W CST9Q06032 482 aa7.85□□□□□ -1.15
ATG1YGL180W IOC4Q04213 475 aa7.82□□□□□ -1.16
ATG1YGL180W YPR148CQ06523 435 aa7.82□□□□□ -1.16
ATG1YGL180W REB1P21538 810 aa7.81□□□□□ -1.16
ATG1YGL180W YAH1Q12184 172 aaKnown RBP7.81□□□□□ -1.16
ATG1YGL180W NAP1P25293 417 aaKnown RBP7.78□□□□□ -1.16
ATG1YGL180W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
ATG1YGL180W NOP8Q08287 484 aaPredicted RBP7.76□□□□□ -1.17
ATG1YGL180W PSD2P53037 1138 aaKnown RBP7.72□□□□□ -1.17
ATG1YGL180W YKR023WP36119 530 aaKnown RBP7.7□□□□□ -1.18
ATG1YGL180W RAM2P29703 316 aa7.7□□□□□ -1.18
ATG1YGL180W DSF2P38213 736 aa7.68□□□□□ -1.18
ATG1YGL180W YML020WQ03722 664 aa7.65□□□□□ -1.18
ATG1YGL180W SET1P38827 1080 aaKnown RBP7.64□□□□□ -1.19
ATG1YGL180W RSM7P47150 247 aa7.64□□□□□ -1.19
ATG1YGL180W KIN1P13185 1064 aa7.62□□□□□ -1.19
ATG1YGL180W SPB4P25808 606 aaPredicted RBP7.59□□□□□ -1.19
ATG1YGL180W VPS70P47161 811 aa7.58□□□□□ -1.2
ATG1YGL180W YIL055CP40523 627 aaKnown RBP7.57□□□□□ -1.2
ATG1YGL180W YNR021WP53723 404 aaKnown RBP7.57□□□□□ -1.2
ATG1YGL180W GUA1P38625 525 aaKnown RBP7.55□□□□□ -1.2
ATG1YGL180W MAM3Q12296 706 aa7.55□□□□□ -1.2
ATG1YGL180W RCR1P38212 213 aa7.54□□□□□ -1.2
ATG1YGL180W AIM7Q12156 149 aa7.53□□□□□ -1.2
ATG1YGL180W NUP42P49686 430 aaKnown RBP7.52□□□□□ -1.21
ATG1YGL180W AIM44Q99299 758 aa7.5□□□□□ -1.21
ATG1YGL180W PBS2P08018 668 aa7.49□□□□□ -1.21
ATG1YGL180W GLC3P32775 704 aa7.49□□□□□ -1.21
ATG1YGL180W SUB2Q07478 446 aaKnown RBP7.48□□□□□ -1.21
ATG1YGL180W SLX8P40072 274 aa7.48□□□□□ -1.21
ATG1YGL180W MRX12P47084 519 aa7.47□□□□□ -1.21
ATG1YGL180W AI2P03876 854 aa7.46□□□□□ -1.21
ATG1YGL180W TFC8Q12308 588 aa7.46□□□□□ -1.21
ATG1YGL180W DIT2P21595 489 aa7.46□□□□□ -1.22
ATG1YGL180W GEF1P37020 779 aa7.44□□□□□ -1.22
ATG1YGL180W SSA1P10591 642 aaKnown RBP7.41□□□□□ -1.22
ATG1YGL180W HPC2Q01448 625 aa7.41□□□□□ -1.22
ATG1YGL180W GLN1P32288 370 aaKnown RBP7.39□□□□□ -1.23
ATG1YGL180W TSR3Q12094 313 aaKnown RBP7.39□□□□□ -1.23
ATG1YGL180W PAM1P37304 830 aaKnown RBP7.38□□□□□ -1.23
ATG1YGL180W DCD1P06773 312 aa7.38□□□□□ -1.23
ATG1YGL180W HOP09932 586 aa7.38□□□□□ -1.23
ATG1YGL180W MAK11P20484 414 aaKnown RBP7.38□□□□□ -1.23
ATG1YGL180W AAD16Q02895 342 aa7.38□□□□□ -1.23
ATG1YGL180W TFB3Q03290 321 aa7.36□□□□□ -1.23
ATG1YGL180W PKC1P24583 1151 aa7.35□□□□□ -1.23
ATG1YGL180W IES2P40154 320 aa7.35□□□□□ -1.23
ATG1YGL180W SEN54Q02825 467 aaPredicted RBP7.33□□□□□ -1.24
ATG1YGL180W BCH2P36122 765 aa7.3□□□□□ -1.24
ATG1YGL180W ATG36P46983 293 aa7.28□□□□□ -1.24
ATG1YGL180W MAK21Q12176 1025 aaKnown RBP7.27□□□□□ -1.25
ATG1YGL180W MRM1P25270 412 aa7.26□□□□□ -1.25
ATG1YGL180W ATG32P40458 529 aa7.26□□□□□ -1.25
ATG1YGL180W NOB1Q08444 459 aaKnown RBP7.25□□□□□ -1.25
ATG1YGL180W COQ8P27697 501 aa7.25□□□□□ -1.25
ATG1YGL180W COX6P00427 148 aa7.24□□□□□ -1.25
ATG1YGL180W BIM1P40013 344 aa7.24□□□□□ -1.25
ATG1YGL180W HGH1P48362 394 aaKnown RBP7.24□□□□□ -1.25
ATG1YGL180W CDC27P38042 758 aa7.24□□□□□ -1.25
ATG1YGL180W VPS29P38759 282 aa7.24□□□□□ -1.25
ATG1YGL180W REF2P42073 533 aaPredicted RBP7.24□□□□□ -1.25
ATG1YGL180W EDS1P38073 919 aa7.22□□□□□ -1.25
ATG1YGL180W NOP53Q12080 455 aaKnown RBP7.22□□□□□ -1.25
ATG1YGL180W RTG3P38165 486 aa7.21□□□□□ -1.26
ATG1YGL180W OCA5P38738 679 aa7.21□□□□□ -1.26
ATG1YGL180W YDR090CQ03193 310 aa7.21□□□□□ -1.26
ATG1YGL180W KTR1P27810 393 aaKnown RBP7.2□□□□□ -1.26
ATG1YGL180W ERG12P07277 443 aa7.2□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms