RNA–Protein interactions for RNA: YMR229C

RRP5, Transcript of RNA binding protein involved in synthesis of both 18S and 5.8S rRNAs, yeast

Gene RRP5, Length 5,190 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP5	YMR229C	RQC2	Q12532	1038 aa	Known RBP	5.1	□□□□□ -1.59
RRP5	YMR229C	MTC1	P47018	478 aa	Known RBP	4.99	□□□□□ -1.61
RRP5	YMR229C	TFA1	P36100	482 aa		4.82	□□□□□ -1.64
RRP5	YMR229C	INO80	P53115	1489 aa		4.82	□□□□□ -1.64
RRP5	YMR229C	DRS1	P32892	752 aa	Known RBP	4.79	□□□□□ -1.64
RRP5	YMR229C	SPA2	P23201	1466 aa	Known RBP	4.77	□□□□□ -1.65
RRP5	YMR229C	SCT1	P32784	759 aa		4.75	□□□□□ -1.65
RRP5	YMR229C	TAF7	Q05021	590 aa		4.72	□□□□□ -1.65
RRP5	YMR229C	RSE1	Q04693	1361 aa	Known RBP	4.67	□□□□□ -1.66
RRP5	YMR229C	SGS1	P35187	1447 aa		4.61	□□□□□ -1.67
RRP5	YMR229C	SAS10	Q12136	610 aa	Predicted RBP	4.6	□□□□□ -1.67
RRP5	YMR229C	RTT106	P40161	455 aa		4.59	□□□□□ -1.67
RRP5	YMR229C	NAP1	P25293	417 aa	Known RBP	4.58	□□□□□ -1.68
RRP5	YMR229C	TCB3	Q03640	1545 aa	Known RBP	4.57	□□□□□ -1.68
RRP5	YMR229C	PAF1	P38351	445 aa		4.52	□□□□□ -1.69
RRP5	YMR229C	URN1	Q06525	465 aa	Known RBP	4.51	□□□□□ -1.69
RRP5	YMR229C	NOP2	P40991	618 aa	Known RBP	4.49	□□□□□ -1.69
RRP5	YMR229C	TAF2	P23255	1407 aa		4.46	□□□□□ -1.7
RRP5	YMR229C	MNN4	P36044	1178 aa		4.45	□□□□□ -1.7
RRP5	YMR229C	BFR2	Q06631	534 aa	Known RBP	4.44	□□□□□ -1.7
RRP5	YMR229C	IFH1	P39520	1085 aa		4.43	□□□□□ -1.7
RRP5	YMR229C	KOG1	P38873	1557 aa		4.42	□□□□□ -1.7
RRP5	YMR229C	SKI3	P17883	1432 aa	Known RBP	4.41	□□□□□ -1.7
RRP5	YMR229C	POL5	P39985	1022 aa	Known RBP	4.41	□□□□□ -1.7
RRP5	YMR229C	NOP7	P53261	605 aa	Known RBP	4.4	□□□□□ -1.71
RRP5	YMR229C	LEU3	P08638	886 aa		4.39	□□□□□ -1.71
RRP5	YMR229C	SPT6	P23615	1451 aa	Known RBP	4.38	□□□□□ -1.71
RRP5	YMR229C	BUD4	P47136	1447 aa		4.38	□□□□□ -1.71
RRP5	YMR229C	ABP1	P15891	592 aa	Known RBP	4.37	□□□□□ -1.71
RRP5	YMR229C	SSN2	P38931	1420 aa		4.36	□□□□□ -1.71
RRP5	YMR229C	STH1	P32597	1359 aa		4.35	□□□□□ -1.71
RRP5	YMR229C	FPR3	P38911	411 aa	Known RBP	4.34	□□□□□ -1.71
RRP5	YMR229C	YTA7	P40340	1379 aa		4.34	□□□□□ -1.72
RRP5	YMR229C	MRX12	P47084	519 aa		4.32	□□□□□ -1.72
RRP5	YMR229C	ORC1	P54784	914 aa	Predicted RBP	4.32	□□□□□ -1.72
RRP5	YMR229C	LEO1	P38439	464 aa		4.31	□□□□□ -1.72
RRP5	YMR229C	CAB3	P36076	571 aa		4.29	□□□□□ -1.72
RRP5	YMR229C	ENP1	P38333	483 aa	Known RBP	4.29	□□□□□ -1.72
RRP5	YMR229C	EAF7	P53911	425 aa	Known RBP	4.29	□□□□□ -1.72
RRP5	YMR229C	CKB1	P43639	278 aa		4.29	□□□□□ -1.72
RRP5	YMR229C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
RRP5	YMR229C	BUD21	Q08492	214 aa	Predicted RBP	4.28	□□□□□ -1.72
RRP5	YMR229C	SMC4	Q12267	1418 aa		4.27	□□□□□ -1.73
RRP5	YMR229C	MIF2	P35201	549 aa		4.27	□□□□□ -1.73
RRP5	YMR229C	AIM44	Q99299	758 aa		4.26	□□□□□ -1.73
RRP5	YMR229C	ECM5	Q03214	1411 aa		4.25	□□□□□ -1.73
RRP5	YMR229C	TRM732	Q03496	1420 aa		4.25	□□□□□ -1.73
RRP5	YMR229C	SWR1	Q05471	1514 aa		4.25	□□□□□ -1.73
RRP5	YMR229C	DNA2	P38859	1522 aa		4.24	□□□□□ -1.73
RRP5	YMR229C	YJL181W	P46987	611 aa		4.23	□□□□□ -1.73
RRP5	YMR229C	MON2	P48563	1636 aa	Predicted RBP	4.23	□□□□□ -1.73
RRP5	YMR229C	XRN1	P22147	1528 aa	Known RBP	4.23	□□□□□ -1.73
RRP5	YMR229C	SIS2	P36024	562 aa		4.22	□□□□□ -1.73
RRP5	YMR229C	SEC3	P33332	1336 aa	Known RBP	4.22	□□□□□ -1.73
RRP5	YMR229C	MET10	P39692	1035 aa		4.22	□□□□□ -1.73
RRP5	YMR229C	DRS2	P39524	1355 aa		4.2	□□□□□ -1.74
RRP5	YMR229C	UBP1	P25037	809 aa		4.17	□□□□□ -1.74
RRP5	YMR229C	AVT3	P36062	692 aa		4.17	□□□□□ -1.74
RRP5	YMR229C	BNR1	P40450	1375 aa		4.17	□□□□□ -1.74
RRP5	YMR229C	TOP2	P06786	1428 aa	Known RBP	4.16	□□□□□ -1.74
RRP5	YMR229C	YFR016C	P43597	1233 aa	Known RBP	4.16	□□□□□ -1.74
RRP5	YMR229C	RTF1	P53064	558 aa		4.16	□□□□□ -1.74
RRP5	YMR229C	MYO2	P19524	1574 aa	Known RBP	4.15	□□□□□ -1.74
RRP5	YMR229C	PAN1	P32521	1480 aa		4.15	□□□□□ -1.74
RRP5	YMR229C	THO2	P53552	1597 aa	Known RBP	4.15	□□□□□ -1.75
RRP5	YMR229C	RRT14	P40470	206 aa		4.14	□□□□□ -1.75
RRP5	YMR229C	STU1	P38198	1513 aa		4.14	□□□□□ -1.75
RRP5	YMR229C	SPT7	P35177	1332 aa		4.13	□□□□□ -1.75
RRP5	YMR229C	TAF5	P38129	798 aa		4.13	□□□□□ -1.75
RRP5	YMR229C	YMR196W	Q04336	1088 aa		4.13	□□□□□ -1.75
RRP5	YMR229C	GEA2	P39993	1459 aa	Known RBP	4.13	□□□□□ -1.75
RRP5	YMR229C	HSL1	P34244	1518 aa		4.12	□□□□□ -1.75
RRP5	YMR229C	IKI3	Q06706	1349 aa	Known RBP	4.11	□□□□□ -1.75
RRP5	YMR229C	SUP35	P05453	685 aa	Known RBP	4.11	□□□□□ -1.75
RRP5	YMR229C	YRB30	P53107	440 aa	Predicted RBP	4.1	□□□□□ -1.75
RRP5	YMR229C	NOP8	Q08287	484 aa	Predicted RBP	4.1	□□□□□ -1.75
RRP5	YMR229C	RPC31	P17890	251 aa		4.1	□□□□□ -1.75
RRP5	YMR229C	PRP40	P33203	583 aa	Known RBP	4.09	□□□□□ -1.75
RRP5	YMR229C	BPT1	P14772	1559 aa		4.09	□□□□□ -1.75
RRP5	YMR229C	COG8	Q04632	607 aa		4.09	□□□□□ -1.75
RRP5	YMR229C	QCR6	P00127	147 aa		4.09	□□□□□ -1.75
RRP5	YMR229C	ESL2	P36168	1195 aa		4.08	□□□□□ -1.76
RRP5	YMR229C	PAP2	P53632	584 aa	Known RBP	4.08	□□□□□ -1.76
RRP5	YMR229C	FUN12	P39730	1002 aa	Known RBP	4.08	□□□□□ -1.76
RRP5	YMR229C	MDS3	P53094	1487 aa		4.08	□□□□□ -1.76
RRP5	YMR229C	LTE1	P07866	1435 aa		4.08	□□□□□ -1.76
RRP5	YMR229C	ENP2	P48234	707 aa	Known RBP	4.08	□□□□□ -1.76
RRP5	YMR229C	RNA1	P11745	407 aa	Known RBP	4.07	□□□□□ -1.76
RRP5	YMR229C	SIN3	P22579	1536 aa		4.07	□□□□□ -1.76
RRP5	YMR229C	REV3	P14284	1504 aa		4.07	□□□□□ -1.76
RRP5	YMR229C	KRI1	P42846	591 aa	Known RBP	4.07	□□□□□ -1.76
RRP5	YMR229C	PDS5	Q04264	1277 aa		4.07	□□□□□ -1.76
RRP5	YMR229C	UFD4	P33202	1483 aa		4.06	□□□□□ -1.76
RRP5	YMR229C	MMS1	Q06211	1407 aa		4.06	□□□□□ -1.76
RRP5	YMR229C	MMS22	Q06164	1454 aa		4.06	□□□□□ -1.76
RRP5	YMR229C	EBP2	P36049	427 aa	Known RBP	4.06	□□□□□ -1.76
RRP5	YMR229C	RAD2	P07276	1031 aa		4.06	□□□□□ -1.76
RRP5	YMR229C	PSD2	P53037	1138 aa	Known RBP	4.05	□□□□□ -1.76
RRP5	YMR229C	ESC2	Q06340	456 aa		4.05	□□□□□ -1.76
RRP5	YMR229C	LAM6	Q08001	693 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms