Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.24■□□□□ 0.67
APEX1P27695 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
APEX1P27695 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
APEX1P27695 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
APEX1P27695 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.24■□□□□ 0.67
APEX1P27695 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
APEX1P27695 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
APEX1P27695 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.23■□□□□ 0.67
APEX1P27695 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.23■□□□□ 0.67
APEX1P27695 PBX2P1-201ENST00000493219 1291 ntBASIC19.23■□□□□ 0.67
APEX1P27695 AC133561.4-201ENST00000566112 224 ntBASIC19.23■□□□□ 0.67
APEX1P27695 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.23■□□□□ 0.67
APEX1P27695 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.23■□□□□ 0.67
APEX1P27695 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
APEX1P27695 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
APEX1P27695 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
APEX1P27695 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
APEX1P27695 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 UNC93B3-201ENST00000308076 687 ntBASIC19.22■□□□□ 0.67
APEX1P27695 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.22■□□□□ 0.67
APEX1P27695 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
APEX1P27695 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
APEX1P27695 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
APEX1P27695 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
APEX1P27695 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.21■□□□□ 0.67
APEX1P27695 RNF165-205ENST00000588679 2904 ntBASIC19.21■□□□□ 0.67
APEX1P27695 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
APEX1P27695 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.21■□□□□ 0.67
APEX1P27695 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.21■□□□□ 0.67
APEX1P27695 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.21■□□□□ 0.67
APEX1P27695 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
APEX1P27695 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
APEX1P27695 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
APEX1P27695 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
APEX1P27695 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
APEX1P27695 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.2■□□□□ 0.66
APEX1P27695 AL138724.1-201ENST00000606771 1088 ntBASIC19.2■□□□□ 0.66
APEX1P27695 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
APEX1P27695 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
APEX1P27695 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
APEX1P27695 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
APEX1P27695 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
APEX1P27695 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
APEX1P27695 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APEX1P27695 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APEX1P27695 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APEX1P27695 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
APEX1P27695 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
APEX1P27695 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.19■□□□□ 0.66
APEX1P27695 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.19■□□□□ 0.66
APEX1P27695 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
APEX1P27695 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
APEX1P27695 AC106739.1-201ENST00000617035 715 ntBASIC19.19■□□□□ 0.66
APEX1P27695 AL157384.1-201ENST00000445995 2473 ntBASIC19.19■□□□□ 0.66
APEX1P27695 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
APEX1P27695 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.19■□□□□ 0.66
APEX1P27695 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.19■□□□□ 0.66
APEX1P27695 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
APEX1P27695 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
APEX1P27695 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APEX1P27695 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.18■□□□□ 0.66
APEX1P27695 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
APEX1P27695 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
APEX1P27695 AL136162.1-201ENST00000607711 1078 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms