Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV1-2A0A0B4J238 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 ABHD17AP5-201ENST00000580133 923 ntBASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV1-2A0A0B4J238 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRAV1-2A0A0B4J238 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 AC021242.3-201ENST00000607598 1377 ntBASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 AC103834.1-201ENST00000520383 144 ntBASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 AC103724.3-201ENST00000564481 992 ntBASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV1-2A0A0B4J238 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV1-2A0A0B4J238 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV1-2A0A0B4J238 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV1-2A0A0B4J238 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV1-2A0A0B4J238 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.58■□□□□ 0.57
TRAV1-2A0A0B4J238 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 TSPY13P-201ENST00000338964 914 ntBASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV1-2A0A0B4J238 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV1-2A0A0B4J238 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms