Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 MIR4508-201ENST00000584178 70 ntBASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGKV2-28A0A075B6P5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.1□□□□□ -0.15
IGKV2-28A0A075B6P5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGKV2-28A0A075B6P5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
IGKV2-28A0A075B6P5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.08□□□□□ -0.15
IGKV2-28A0A075B6P5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
IGKV2-28A0A075B6P5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.08□□□□□ -0.15
IGKV2-28A0A075B6P5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
IGKV2-28A0A075B6P5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGKV2-28A0A075B6P5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
IGKV2-28A0A075B6P5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms