Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC011431.1-201ENST00000512971 230 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AL139021.1-201ENST00000556734 436 ntTSL 3 BASIC12.31□□□□□ -0.44
SLC1A1P43005 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AC063977.2-201ENST00000601996 421 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 AC097534.2-204ENST00000608892 284 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AL133551.1-201ENST00000610279 1222 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AC092471.1-202ENST00000637160 999 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 LINC01600-201ENST00000624527 2434 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 SLC1A7-205ENST00000620288 3378 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC12.31□□□□□ -0.44
SLC1A1P43005 AC024568.1-201ENST00000517330 2260 ntBASIC12.31□□□□□ -0.44
SLC1A1P43005 C2orf88-201ENST00000340623 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 TGM5-206ENST00000611276 2510 ntTSL 5 BASIC12.31□□□□□ -0.44
SLC1A1P43005 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SLC1A1P43005 FAM193A-202ENST00000382839 4710 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 CLCN5-203ENST00000376091 3046 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 UTP14A-202ENST00000425117 2403 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 CEACAM19-201ENST00000358777 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC016949.1-201ENST00000432047 1413 ntTSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 LEPR-204ENST00000371059 3079 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 CICP3-201ENST00000440782 2455 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 DRGX-201ENST00000374139 2738 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 LINC01219-201ENST00000418612 722 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 TUBB8P9-201ENST00000422534 1276 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 PHKG1P4-201ENST00000430144 370 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 TUBB8P10-201ENST00000430210 1279 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 BX842568.1-201ENST00000435382 551 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 SLC18A1-205ENST00000440926 2956 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC010900.1-201ENST00000449849 1296 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC067942.2-201ENST00000506227 1268 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 IGKV2-10-201ENST00000518834 351 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 SDHD-205ENST00000528048 905 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC127537.3-201ENST00000566532 749 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 RPL23-207ENST00000577407 615 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 RN7SL750P-201ENST00000582814 238 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 AC020913.1-202ENST00000599360 467 ntTSL 3 BASIC12.3□□□□□ -0.44
SLC1A1P43005 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 AP006621.5-202ENST00000623692 636 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 PCDHB12-201ENST00000239450 3853 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SLC1A1P43005 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 VPS4A-201ENST00000254950 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 DEDD-210ENST00000490843 1527 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SLC1A1P43005 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 RPH3A-213ENST00000548866 2429 ntTSL 2 BASIC12.3□□□□□ -0.44
SLC1A1P43005 AL445471.2-201ENST00000568143 2443 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 RNF10-201ENST00000325954 3825 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 AC005531.1-201ENST00000520729 1360 ntBASIC12.3□□□□□ -0.44
SLC1A1P43005 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SLC1A1P43005 NT5C1B-RDH14-202ENST00000532967 2142 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 LINC00551-201ENST00000607593 1668 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 SP100-203ENST00000409112 2198 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 SLC7A6OS-201ENST00000263997 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 372.3 ms