RNA–Protein interactions for RNA: ENST00000322989.8

RPS15A-201, Transcript of ribosomal protein S15a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS15A, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS15A-201ENST00000322989 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
RPS15A-201ENST00000322989 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
RPS15A-201ENST00000322989 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
RPS15A-201ENST00000322989 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
RPS15A-201ENST00000322989 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
RPS15A-201ENST00000322989 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
RPS15A-201ENST00000322989 DCAF1Q9Y4B6 1507 aa20.24■□□□□ 0.83
RPS15A-201ENST00000322989 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.75
RPS15A-201ENST00000322989 ABCC9O60706 1549 aa19.69■□□□□ 0.74
RPS15A-201ENST00000322989 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
RPS15A-201ENST00000322989 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.73
RPS15A-201ENST00000322989 NACADO15069 1562 aa19.55■□□□□ 0.72
RPS15A-201ENST00000322989 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
RPS15A-201ENST00000322989 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
RPS15A-201ENST00000322989 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
RPS15A-201ENST00000322989 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
RPS15A-201ENST00000322989 WIZO95785 1651 aa18.97■□□□□ 0.63
RPS15A-201ENST00000322989 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
RPS15A-201ENST00000322989 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
RPS15A-201ENST00000322989 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
RPS15A-201ENST00000322989 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
RPS15A-201ENST00000322989 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
RPS15A-201ENST00000322989 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
RPS15A-201ENST00000322989 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
RPS15A-201ENST00000322989 TOP2AP11388 1531 aaKnown RBP18.71■□□□□ 0.59
RPS15A-201ENST00000322989 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
RPS15A-201ENST00000322989 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
RPS15A-201ENST00000322989 CCDC88BA6NC98 1476 aa18.62■□□□□ 0.57
RPS15A-201ENST00000322989 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
RPS15A-201ENST00000322989 SMARCA2P51531 1590 aa18.58■□□□□ 0.56
RPS15A-201ENST00000322989 HRCP23327 699 aa18.52■□□□□ 0.56
RPS15A-201ENST00000322989 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
RPS15A-201ENST00000322989 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
RPS15A-201ENST00000322989 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
RPS15A-201ENST00000322989 TRIM26Q12899 539 aaPredicted RBP18.43■□□□□ 0.54
RPS15A-201ENST00000322989 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
RPS15A-201ENST00000322989 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
RPS15A-201ENST00000322989 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
RPS15A-201ENST00000322989 SOGA1O94964 1423 aa18.25■□□□□ 0.51
RPS15A-201ENST00000322989 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.514e-9■■□□□ 14.2
RPS15A-201ENST00000322989 EEA1Q15075 1411 aa18.17■□□□□ 0.5
RPS15A-201ENST00000322989 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
RPS15A-201ENST00000322989 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
RPS15A-201ENST00000322989 PPARGC1BQ86YN6 1023 aaKnown RBP18.13■□□□□ 0.49
RPS15A-201ENST00000322989 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
RPS15A-201ENST00000322989 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
RPS15A-201ENST00000322989 TNIKQ9UKE5 1360 aa18.07■□□□□ 0.48
RPS15A-201ENST00000322989 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
RPS15A-201ENST00000322989 UBTFP17480 764 aaKnown RBP18.06■□□□□ 0.48
RPS15A-201ENST00000322989 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
RPS15A-201ENST00000322989 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
RPS15A-201ENST00000322989 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
RPS15A-201ENST00000322989 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
RPS15A-201ENST00000322989 TOP2BQ02880 1626 aa17.94■□□□□ 0.46
RPS15A-201ENST00000322989 MYT1Q01538 1121 aa17.93■□□□□ 0.46
RPS15A-201ENST00000322989 KIF21BO75037 1637 aa17.89■□□□□ 0.46
RPS15A-201ENST00000322989 CFTRP13569 1480 aa17.87■□□□□ 0.45
RPS15A-201ENST00000322989 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
RPS15A-201ENST00000322989 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
RPS15A-201ENST00000322989 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
RPS15A-201ENST00000322989 CUX1P39880 1505 aa17.81■□□□□ 0.44
RPS15A-201ENST00000322989 CLIP1P30622 1438 aa17.79■□□□□ 0.44
RPS15A-201ENST00000322989 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
RPS15A-201ENST00000322989 CADPSQ9ULU8 1353 aa17.73■□□□□ 0.43
RPS15A-201ENST00000322989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.71■□□□□ 0.43
RPS15A-201ENST00000322989 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
RPS15A-201ENST00000322989 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
RPS15A-201ENST00000322989 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
RPS15A-201ENST00000322989 VPS8Q8N3P4 1428 aa17.68■□□□□ 0.42
RPS15A-201ENST00000322989 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
RPS15A-201ENST00000322989 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
RPS15A-201ENST00000322989 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
RPS15A-201ENST00000322989 APLP2Q06481 763 aa17.62■□□□□ 0.41
RPS15A-201ENST00000322989 CUX2O14529 1486 aa17.56■□□□□ 0.4
RPS15A-201ENST00000322989 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
RPS15A-201ENST00000322989 FGD5Q6ZNL6 1462 aa17.53■□□□□ 0.4
RPS15A-201ENST00000322989 IGF1RP08069 1367 aa17.52■□□□□ 0.4
RPS15A-201ENST00000322989 ARAP1Q96P48 1450 aa17.52■□□□□ 0.39
RPS15A-201ENST00000322989 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
RPS15A-201ENST00000322989 NESP48681 1621 aa17.46■□□□□ 0.39
RPS15A-201ENST00000322989 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
RPS15A-201ENST00000322989 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
RPS15A-201ENST00000322989 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
RPS15A-201ENST00000322989 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
RPS15A-201ENST00000322989 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
RPS15A-201ENST00000322989 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
RPS15A-201ENST00000322989 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
RPS15A-201ENST00000322989 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
RPS15A-201ENST00000322989 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
RPS15A-201ENST00000322989 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.37
RPS15A-201ENST00000322989 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
RPS15A-201ENST00000322989 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
RPS15A-201ENST00000322989 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
RPS15A-201ENST00000322989 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
RPS15A-201ENST00000322989 CUL7Q14999 1698 aa17.2■□□□□ 0.34
RPS15A-201ENST00000322989 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
RPS15A-201ENST00000322989 FHAD1B1AJZ9 1412 aa17.18■□□□□ 0.34
RPS15A-201ENST00000322989 CCNB3Q8WWL7 1395 aa17.18■□□□□ 0.34
RPS15A-201ENST00000322989 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
RPS15A-201ENST00000322989 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms