RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
PCDHB12-201ENST00000239450 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.09
PCDHB12-201ENST00000239450 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
PCDHB12-201ENST00000239450 SUPT5HO00267 1087 aaKnown RBP20.81■□□□□ 0.92
PCDHB12-201ENST00000239450 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
PCDHB12-201ENST00000239450 ABCC9O60706 1549 aa20.48■□□□□ 0.87
PCDHB12-201ENST00000239450 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
PCDHB12-201ENST00000239450 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
PCDHB12-201ENST00000239450 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.76
PCDHB12-201ENST00000239450 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
PCDHB12-201ENST00000239450 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
PCDHB12-201ENST00000239450 FAM9AQ8IZU1 332 aaPredicted RBP19.43■□□□□ 0.7
PCDHB12-201ENST00000239450 NACADO15069 1562 aa19.39■□□□□ 0.69
PCDHB12-201ENST00000239450 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
PCDHB12-201ENST00000239450 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
PCDHB12-201ENST00000239450 TRIM41Q8WV44 630 aa19.24■□□□□ 0.67
PCDHB12-201ENST00000239450 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
PCDHB12-201ENST00000239450 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
PCDHB12-201ENST00000239450 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
PCDHB12-201ENST00000239450 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
PCDHB12-201ENST00000239450 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
PCDHB12-201ENST00000239450 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
PCDHB12-201ENST00000239450 WIZO95785 1651 aa18.8■□□□□ 0.6
PCDHB12-201ENST00000239450 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
PCDHB12-201ENST00000239450 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
PCDHB12-201ENST00000239450 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
PCDHB12-201ENST00000239450 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
PCDHB12-201ENST00000239450 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
PCDHB12-201ENST00000239450 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
PCDHB12-201ENST00000239450 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
PCDHB12-201ENST00000239450 BICRAQ9NZM4 1560 aa18.55■□□□□ 0.56
PCDHB12-201ENST00000239450 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
PCDHB12-201ENST00000239450 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
PCDHB12-201ENST00000239450 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
PCDHB12-201ENST00000239450 ATAD2BQ9ULI0 1458 aa18.4■□□□□ 0.54
PCDHB12-201ENST00000239450 TOP2AP11388 1531 aaKnown RBP18.39■□□□□ 0.53
PCDHB12-201ENST00000239450 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
PCDHB12-201ENST00000239450 SMARCA2P51531 1590 aa18.26■□□□□ 0.51
PCDHB12-201ENST00000239450 EIF4G1Q04637 1599 aaKnown RBP18.23■□□□□ 0.51
PCDHB12-201ENST00000239450 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
PCDHB12-201ENST00000239450 SOGA1O94964 1423 aa18.21■□□□□ 0.5
PCDHB12-201ENST00000239450 APLP2Q06481 763 aa18.2■□□□□ 0.5
PCDHB12-201ENST00000239450 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
PCDHB12-201ENST00000239450 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
PCDHB12-201ENST00000239450 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
PCDHB12-201ENST00000239450 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
PCDHB12-201ENST00000239450 NCAPD3P42695 1498 aa18.02■□□□□ 0.48
PCDHB12-201ENST00000239450 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
PCDHB12-201ENST00000239450 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
PCDHB12-201ENST00000239450 HRCP23327 699 aa17.96■□□□□ 0.46
PCDHB12-201ENST00000239450 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
PCDHB12-201ENST00000239450 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
PCDHB12-201ENST00000239450 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
PCDHB12-201ENST00000239450 NESP48681 1621 aa17.86■□□□□ 0.45
PCDHB12-201ENST00000239450 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
PCDHB12-201ENST00000239450 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
PCDHB12-201ENST00000239450 ITGAEP38570 1179 aa17.85■□□□□ 0.45
PCDHB12-201ENST00000239450 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
PCDHB12-201ENST00000239450 FBLN2P98095 1184 aa17.84■□□□□ 0.45
PCDHB12-201ENST00000239450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
PCDHB12-201ENST00000239450 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
PCDHB12-201ENST00000239450 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
PCDHB12-201ENST00000239450 CUX2O14529 1486 aa17.79■□□□□ 0.44
PCDHB12-201ENST00000239450 EEA1Q15075 1411 aa17.78■□□□□ 0.44
PCDHB12-201ENST00000239450 ARID3CA6NKF2 412 aa17.77■□□□□ 0.43
PCDHB12-201ENST00000239450 KIF27Q86VH2 1401 aa17.77■□□□□ 0.43
PCDHB12-201ENST00000239450 CLIP1P30622 1438 aa17.75■□□□□ 0.43
PCDHB12-201ENST00000239450 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
PCDHB12-201ENST00000239450 CFTRP13569 1480 aa17.75■□□□□ 0.43
PCDHB12-201ENST00000239450 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
PCDHB12-201ENST00000239450 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
PCDHB12-201ENST00000239450 RAPGEF2Q9Y4G8 1499 aa17.71■□□□□ 0.43
PCDHB12-201ENST00000239450 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
PCDHB12-201ENST00000239450 CUX1P39880 1505 aa17.66■□□□□ 0.42
PCDHB12-201ENST00000239450 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
PCDHB12-201ENST00000239450 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
PCDHB12-201ENST00000239450 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
PCDHB12-201ENST00000239450 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
PCDHB12-201ENST00000239450 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
PCDHB12-201ENST00000239450 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
PCDHB12-201ENST00000239450 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
PCDHB12-201ENST00000239450 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
PCDHB12-201ENST00000239450 IGF1RP08069 1367 aa17.51■□□□□ 0.39
PCDHB12-201ENST00000239450 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
PCDHB12-201ENST00000239450 KANK4Q5T7N3 995 aaPredicted RBP17.46■□□□□ 0.38
PCDHB12-201ENST00000239450 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
PCDHB12-201ENST00000239450 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
PCDHB12-201ENST00000239450 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
PCDHB12-201ENST00000239450 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
PCDHB12-201ENST00000239450 URB2Q14146 1524 aaKnown RBP17.35■□□□□ 0.37
PCDHB12-201ENST00000239450 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
PCDHB12-201ENST00000239450 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
PCDHB12-201ENST00000239450 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
PCDHB12-201ENST00000239450 KIF21BO75037 1637 aa17.31■□□□□ 0.36
PCDHB12-201ENST00000239450 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PCDHB12-201ENST00000239450 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
PCDHB12-201ENST00000239450 DNMBPQ6XZF7 1577 aa17.29■□□□□ 0.36
PCDHB12-201ENST00000239450 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
PCDHB12-201ENST00000239450 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
PCDHB12-201ENST00000239450 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms