RNA–Protein interactions for RNA: ENST00000482218.2

CLCN5-205, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 3 BASIC

Gene CLCN5, Length 449 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-205ENST00000482218 AEBP2Q6ZN18 517 aaPredicted RBP35.21■■■■□ 3.23
CLCN5-205ENST00000482218 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
CLCN5-205ENST00000482218 SENP3Q9H4L4 574 aaPredicted RBP30.38■■■□□ 2.45
CLCN5-205ENST00000482218 PHF23Q9BUL5 403 aaPredicted RBP29.77■■■□□ 2.36
CLCN5-205ENST00000482218 NISCHQ9Y2I1 1504 aa28.23■■■□□ 2.11
CLCN5-205ENST00000482218 FOXD1Q16676 465 aa28.21■■■□□ 2.11
CLCN5-205ENST00000482218 POTEDQ86YR6 584 aa26.97■■□□□ 1.91
CLCN5-205ENST00000482218 MSH5O43196 834 aa26.82■■□□□ 1.88
CLCN5-205ENST00000482218 PIAS4Q8N2W9 510 aaPredicted RBP26.35■■□□□ 1.81
CLCN5-205ENST00000482218 PLPPR3Q6T4P5 718 aa26.24■■□□□ 1.79
CLCN5-205ENST00000482218 PPP6R1Q9UPN7 881 aa25.84■■□□□ 1.73
CLCN5-205ENST00000482218 ADRA2BP18089 450 aa25.79■■□□□ 1.72
CLCN5-205ENST00000482218 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.56
CLCN5-205ENST00000482218 ABCC9O60706 1549 aa24.11■■□□□ 1.45
CLCN5-205ENST00000482218 DMRT2Q9Y5R5 561 aa23.93■■□□□ 1.42
CLCN5-205ENST00000482218 SCAF1Q9H7N4 1312 aaKnown RBP23.86■■□□□ 1.41
CLCN5-205ENST00000482218 MAPK8IP2Q13387 824 aaPredicted RBP23.81■■□□□ 1.4
CLCN5-205ENST00000482218 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
CLCN5-205ENST00000482218 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
CLCN5-205ENST00000482218 NACADO15069 1562 aa23.35■■□□□ 1.33
CLCN5-205ENST00000482218 DCAF1Q9Y4B6 1507 aa23.33■■□□□ 1.33
CLCN5-205ENST00000482218 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
CLCN5-205ENST00000482218 CACNB1Q02641 598 aaPredicted RBP23.31■■□□□ 1.32
CLCN5-205ENST00000482218 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
CLCN5-205ENST00000482218 DCAF8L1A6NGE4 600 aa23.05■■□□□ 1.28
CLCN5-205ENST00000482218 PPP4R3CPQ6ZMV5 832 aa22.84■■□□□ 1.25
CLCN5-205ENST00000482218 HOXD11P31277 338 aaPredicted RBP22.8■■□□□ 1.24
CLCN5-205ENST00000482218 SCRIBQ14160 1630 aa22.72■■□□□ 1.23
CLCN5-205ENST00000482218 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
CLCN5-205ENST00000482218 RNF39Q9H2S5 420 aa22.72■■□□□ 1.23
CLCN5-205ENST00000482218 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
CLCN5-205ENST00000482218 CNKSR2Q8WXI2 1034 aa22.61■■□□□ 1.21
CLCN5-205ENST00000482218 BICRAQ9NZM4 1560 aa22.61■■□□□ 1.21
CLCN5-205ENST00000482218 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
CLCN5-205ENST00000482218 RNF216Q9NWF9 866 aaPredicted RBP22.53■■□□□ 1.2
CLCN5-205ENST00000482218 C1QBPQ07021 282 aaKnown RBP22.44■■□□□ 1.18
CLCN5-205ENST00000482218 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
CLCN5-205ENST00000482218 CECR2Q9BXF3 1484 aa22■■□□□ 1.11
CLCN5-205ENST00000482218 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
CLCN5-205ENST00000482218 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
CLCN5-205ENST00000482218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.83■■□□□ 1.09
CLCN5-205ENST00000482218 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
CLCN5-205ENST00000482218 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
CLCN5-205ENST00000482218 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
CLCN5-205ENST00000482218 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
CLCN5-205ENST00000482218 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
CLCN5-205ENST00000482218 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.06
CLCN5-205ENST00000482218 NCAPD3P42695 1498 aa21.6■■□□□ 1.05
CLCN5-205ENST00000482218 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
CLCN5-205ENST00000482218 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
CLCN5-205ENST00000482218 WIZO95785 1651 aa21.52■■□□□ 1.04
CLCN5-205ENST00000482218 NPM3O75607 178 aaKnown RBP21.45■■□□□ 1.02
CLCN5-205ENST00000482218 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
CLCN5-205ENST00000482218 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
CLCN5-205ENST00000482218 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
CLCN5-205ENST00000482218 TOP2AP11388 1531 aaKnown RBP21.27■■□□□ 1
CLCN5-205ENST00000482218 U3KPZ7 1027 aaPredicted RBP21.19■□□□□ 0.98
CLCN5-205ENST00000482218 CAPN15O75808 1086 aa21.14■□□□□ 0.97
CLCN5-205ENST00000482218 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
CLCN5-205ENST00000482218 POTEHQ6S545 545 aa21.08■□□□□ 0.97
CLCN5-205ENST00000482218 DSG3P32926 999 aa21.06■□□□□ 0.96
CLCN5-205ENST00000482218 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
CLCN5-205ENST00000482218 CADPSQ9ULU8 1353 aa21■□□□□ 0.95
CLCN5-205ENST00000482218 NESP48681 1621 aa20.97■□□□□ 0.95
CLCN5-205ENST00000482218 CFTRP13569 1480 aa20.91■□□□□ 0.94
CLCN5-205ENST00000482218 LAMC3Q9Y6N6 1575 aa20.89■□□□□ 0.94
CLCN5-205ENST00000482218 APLP2Q06481 763 aa20.84■□□□□ 0.93
CLCN5-205ENST00000482218 PDS5BQ9NTI5 1447 aa20.8■□□□□ 0.92
CLCN5-205ENST00000482218 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
CLCN5-205ENST00000482218 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
CLCN5-205ENST00000482218 ZNF219Q9P2Y4 722 aaPredicted RBP20.68■□□□□ 0.9
CLCN5-205ENST00000482218 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
CLCN5-205ENST00000482218 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
CLCN5-205ENST00000482218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
CLCN5-205ENST00000482218 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
CLCN5-205ENST00000482218 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
CLCN5-205ENST00000482218 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
CLCN5-205ENST00000482218 SLC4A2P04920 1241 aa20.56■□□□□ 0.88
CLCN5-205ENST00000482218 ABCB7O75027 752 aa20.53■□□□□ 0.88
CLCN5-205ENST00000482218 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
CLCN5-205ENST00000482218 URB2Q14146 1524 aaKnown RBP20.5■□□□□ 0.87
CLCN5-205ENST00000482218 KCNA4P22459 653 aa20.5■□□□□ 0.87
CLCN5-205ENST00000482218 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
CLCN5-205ENST00000482218 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
CLCN5-205ENST00000482218 WDR62O43379 1518 aa20.43■□□□□ 0.86
CLCN5-205ENST00000482218 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
CLCN5-205ENST00000482218 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
CLCN5-205ENST00000482218 CUX1P39880 1505 aa20.39■□□□□ 0.85
CLCN5-205ENST00000482218 WRNQ14191 1432 aaPredicted RBP eCLIP20.38■□□□□ 0.85
CLCN5-205ENST00000482218 CUX2O14529 1486 aa20.37■□□□□ 0.85
CLCN5-205ENST00000482218 DNMBPQ6XZF7 1577 aa20.37■□□□□ 0.85
CLCN5-205ENST00000482218 RBM42Q9BTD8 480 aaKnown RBP20.32■□□□□ 0.84
CLCN5-205ENST00000482218 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
CLCN5-205ENST00000482218 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
CLCN5-205ENST00000482218 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
CLCN5-205ENST00000482218 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
CLCN5-205ENST00000482218 SOGA1O94964 1423 aa20.25■□□□□ 0.83
CLCN5-205ENST00000482218 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
CLCN5-205ENST00000482218 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
CLCN5-205ENST00000482218 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms