Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DHDDS-201ENST00000236342 1403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 HSPA8P7-201ENST00000443628 1948 ntBASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 NICN1-208ENST00000615713 1921 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 EPB42-201ENST00000300215 4553 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 CEP89-204ENST00000590597 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NPIPA3F8WFD2 AC243772.2-201ENST00000428289 3543 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 MAGEA11-201ENST00000333104 1845 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 SCML4-202ENST00000369021 2056 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 NOBOX-202ENST00000483238 1980 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC106872.1-201ENST00000512492 1360 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 YIPF1-202ENST00000371399 1503 ntTSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 SAMMSON-221ENST00000641715 1546 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 RNA5SP324-201ENST00000365177 108 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 U3.49-201ENST00000391065 214 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 CHN2-209ENST00000421775 825 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 UQCRFS1P2-201ENST00000426701 722 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 CSMD2-AS1-205ENST00000434181 655 ntTSL 3 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 FAM238B-203ENST00000434458 880 ntTSL 3 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AL109936.1-201ENST00000442089 460 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC245517.1-201ENST00000444224 1262 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 MIR2110-201ENST00000459421 75 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 RN7SL614P-201ENST00000461850 280 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC079804.3-201ENST00000508367 1000 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 LINC01485-204ENST00000522731 614 ntTSL 4 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AL031775.2-201ENST00000606921 405 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 MIR6819-201ENST00000622122 61 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 HPCAL4-203ENST00000617690 4758 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC022748.2-203ENST00000564933 1432 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 LINC01480-204ENST00000597199 1718 ntBASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 AC027801.1-201ENST00000376609 2100 ntTSL 2 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 ZNF619-209ENST00000521353 1869 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 CRISP2-203ENST00000618917 1492 ntTSL 5 BASIC10.81□□□□□ -0.68
NPIPA3F8WFD2 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AL160006.1-201ENST00000554749 4216 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 GNA13-202ENST00000541118 1502 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 PROKR2-201ENST00000217270 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 KRTAP13-1-201ENST00000355459 749 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 DHDDS-203ENST00000374185 1148 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SEC14L2-201ENST00000402592 1229 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AL591503.3-201ENST00000423038 635 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 VN1R64P-201ENST00000424940 933 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 ATP6AP1L-202ENST00000439350 758 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AP000350.1-201ENST00000443377 532 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 LINC01270-202ENST00000457853 943 ntTSL 3 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC136632.1-201ENST00000477964 591 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 IGKV2-10-201ENST00000518834 351 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 DIO3OS-209ENST00000556266 401 ntTSL 3 BASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 RN7SL624P-201ENST00000580297 278 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 AC100830.3-201ENST00000583044 554 ntBASIC10.8□□□□□ -0.68
NPIPA3F8WFD2 SDHDP1-201ENST00000588055 474 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms