Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 AGPAT4-IT1-201ENST00000624499 1878 ntBASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
NPIPA3F8WFD2 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 CLK4-215ENST00000611733 2182 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 MCMDC2-202ENST00000396592 2373 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 TSN-202ENST00000409193 1436 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AC016949.1-201ENST00000432047 1413 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 LINC00954-201ENST00000433669 2472 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AC018737.2-201ENST00000624478 1512 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 FP475955.3-201ENST00000623678 1612 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 SLC6A20-201ENST00000353278 5247 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 HS1BP3-202ENST00000402541 4358 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 GPHA2-201ENST00000279168 747 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 IDO2-202ENST00000389060 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 TRBV22-1-201ENST00000424543 337 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 STYXL1-206ENST00000431581 1147 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 GAPDHP2-201ENST00000432206 998 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AL589843.2-201ENST00000445872 1262 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AC104371.1-201ENST00000522077 797 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 Metazoa_SRP.174-201ENST00000619127 283 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 TPRXL-213ENST00000636198 651 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 LINC01304-201ENST00000425949 1475 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 RHCG-201ENST00000268122 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 GRAMD1B-201ENST00000322282 2571 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 FAM47A-202ENST00000613251 2518 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 XPNPEP1-203ENST00000369683 2344 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 LINC00346-201ENST00000538077 6265 ntBASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 DCAF4L1-201ENST00000333141 4772 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 SLC26A5-204ENST00000356767 1404 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 FHL2-204ENST00000393352 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC10.84□□□□□ -0.67
NPIPA3F8WFD2 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 GPRASP2-205ENST00000543253 3935 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 PI4KB-204ENST00000368875 3983 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 TRMT5-201ENST00000261249 5573 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SLC17A2-201ENST00000265425 1493 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 FAM133B-203ENST00000438306 2434 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 SUV39H1-201ENST00000337852 2978 ntTSL 2 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 B9D1-204ENST00000395616 733 ntTSL 3 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC092966.1-201ENST00000414895 526 ntTSL 5 BASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC087163.1-201ENST00000430089 381 ntBASIC10.83□□□□□ -0.68
NPIPA3F8WFD2 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 352.1 ms