RNA–Protein interactions for RNA: ENST00000241274.3

SLITRK3-201, Transcript of SLIT and NTRK like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK3, Length 4,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK3-201ENST00000241274 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
SLITRK3-201ENST00000241274 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
SLITRK3-201ENST00000241274 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
SLITRK3-201ENST00000241274 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
SLITRK3-201ENST00000241274 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
SLITRK3-201ENST00000241274 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
SLITRK3-201ENST00000241274 PCGF6Q9BYE7 350 aa21■□□□□ 0.95
SLITRK3-201ENST00000241274 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
SLITRK3-201ENST00000241274 HRCP23327 699 aa20.95■□□□□ 0.94
SLITRK3-201ENST00000241274 ABCC9O60706 1549 aa20.6■□□□□ 0.89
SLITRK3-201ENST00000241274 DCAF1Q9Y4B6 1507 aa20.59■□□□□ 0.89
SLITRK3-201ENST00000241274 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
SLITRK3-201ENST00000241274 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
SLITRK3-201ENST00000241274 MYO15BQ96JP2 1530 aa20.24■□□□□ 0.83
SLITRK3-201ENST00000241274 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
SLITRK3-201ENST00000241274 NACADO15069 1562 aa20.17■□□□□ 0.82
SLITRK3-201ENST00000241274 EHMT2Q96KQ7 1210 aa20.12■□□□□ 0.81
SLITRK3-201ENST00000241274 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
SLITRK3-201ENST00000241274 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
SLITRK3-201ENST00000241274 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
SLITRK3-201ENST00000241274 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
SLITRK3-201ENST00000241274 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
SLITRK3-201ENST00000241274 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
SLITRK3-201ENST00000241274 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
SLITRK3-201ENST00000241274 ZEB1P37275 1124 aaPredicted RBP19.67■□□□□ 0.74
SLITRK3-201ENST00000241274 CECR2Q9BXF3 1484 aa19.6■□□□□ 0.73
SLITRK3-201ENST00000241274 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
SLITRK3-201ENST00000241274 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
SLITRK3-201ENST00000241274 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
SLITRK3-201ENST00000241274 MROH2BQ7Z745 1585 aa19.47■□□□□ 0.71
SLITRK3-201ENST00000241274 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
SLITRK3-201ENST00000241274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.46■□□□□ 0.71
SLITRK3-201ENST00000241274 CCER1Q8TC90 406 aaPredicted RBP19.45■□□□□ 0.7
SLITRK3-201ENST00000241274 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
SLITRK3-201ENST00000241274 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
SLITRK3-201ENST00000241274 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
SLITRK3-201ENST00000241274 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
SLITRK3-201ENST00000241274 WIZO95785 1651 aa19.29■□□□□ 0.68
SLITRK3-201ENST00000241274 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.67
SLITRK3-201ENST00000241274 MYT1Q01538 1121 aa19.23■□□□□ 0.67
SLITRK3-201ENST00000241274 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
SLITRK3-201ENST00000241274 SMARCA4P51532 1647 aa19.21■□□□□ 0.66
SLITRK3-201ENST00000241274 BICRAQ9NZM4 1560 aa19.16■□□□□ 0.66
SLITRK3-201ENST00000241274 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
SLITRK3-201ENST00000241274 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.63
SLITRK3-201ENST00000241274 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
SLITRK3-201ENST00000241274 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
SLITRK3-201ENST00000241274 SMARCA2P51531 1590 aa18.92■□□□□ 0.62
SLITRK3-201ENST00000241274 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
SLITRK3-201ENST00000241274 MIER1Q8N108 512 aa18.76■□□□□ 0.59
SLITRK3-201ENST00000241274 ZNF316A6NFI3 1004 aaPredicted RBP18.76■□□□□ 0.59
SLITRK3-201ENST00000241274 ABCC8Q09428 1581 aa18.75■□□□□ 0.59
SLITRK3-201ENST00000241274 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
SLITRK3-201ENST00000241274 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
SLITRK3-201ENST00000241274 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
SLITRK3-201ENST00000241274 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
SLITRK3-201ENST00000241274 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
SLITRK3-201ENST00000241274 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
SLITRK3-201ENST00000241274 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
SLITRK3-201ENST00000241274 EEA1Q15075 1411 aa18.56■□□□□ 0.56
SLITRK3-201ENST00000241274 HMGXB3Q12766 1538 aa18.56■□□□□ 0.56
SLITRK3-201ENST00000241274 SOGA1O94964 1423 aa18.55■□□□□ 0.56
SLITRK3-201ENST00000241274 BCANQ96GW7 911 aa18.54■□□□□ 0.56
SLITRK3-201ENST00000241274 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
SLITRK3-201ENST00000241274 RUSC2Q8N2Y8 1516 aa18.38■□□□□ 0.53
SLITRK3-201ENST00000241274 APLP2Q06481 763 aa18.38■□□□□ 0.53
SLITRK3-201ENST00000241274 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
SLITRK3-201ENST00000241274 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
SLITRK3-201ENST00000241274 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
SLITRK3-201ENST00000241274 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
SLITRK3-201ENST00000241274 BCL11AQ9H165 835 aa18.36■□□□□ 0.53
SLITRK3-201ENST00000241274 SUPT16HQ9Y5B9 1047 aaKnown RBP18.35■□□□□ 0.53
SLITRK3-201ENST00000241274 CFTRP13569 1480 aa18.34■□□□□ 0.53
SLITRK3-201ENST00000241274 CEP162Q5TB80 1403 aa18.33■□□□□ 0.52
SLITRK3-201ENST00000241274 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
SLITRK3-201ENST00000241274 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
SLITRK3-201ENST00000241274 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
SLITRK3-201ENST00000241274 KIF27Q86VH2 1401 aa18.25■□□□□ 0.51
SLITRK3-201ENST00000241274 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
SLITRK3-201ENST00000241274 ITGAEP38570 1179 aa18.19■□□□□ 0.5
SLITRK3-201ENST00000241274 CLIP1P30622 1438 aa18.18■□□□□ 0.5
SLITRK3-201ENST00000241274 CUX1P39880 1505 aa18.17■□□□□ 0.5
SLITRK3-201ENST00000241274 FKBP8Q14318 412 aa18.16■□□□□ 0.5
SLITRK3-201ENST00000241274 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
SLITRK3-201ENST00000241274 CUX2O14529 1486 aa18.13■□□□□ 0.49
SLITRK3-201ENST00000241274 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
SLITRK3-201ENST00000241274 KCNH8Q96L42 1107 aa18.11■□□□□ 0.49
SLITRK3-201ENST00000241274 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
SLITRK3-201ENST00000241274 KIF21BO75037 1637 aa18.08■□□□□ 0.49
SLITRK3-201ENST00000241274 NEFLP07196 543 aa18.08■□□□□ 0.49
SLITRK3-201ENST00000241274 ERICH6Q7L0X2 663 aa18.06■□□□□ 0.48
SLITRK3-201ENST00000241274 NESP48681 1621 aa18.06■□□□□ 0.48
SLITRK3-201ENST00000241274 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
SLITRK3-201ENST00000241274 FGD5Q6ZNL6 1462 aa18.04■□□□□ 0.48
SLITRK3-201ENST00000241274 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
SLITRK3-201ENST00000241274 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
SLITRK3-201ENST00000241274 ATP1B4Q9UN42 357 aaPredicted RBP17.99■□□□□ 0.47
SLITRK3-201ENST00000241274 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
SLITRK3-201ENST00000241274 PRXQ9BXM0 1461 aa17.97■□□□□ 0.47
SLITRK3-201ENST00000241274 VPS8Q8N3P4 1428 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms