Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 MIR7108-201ENST00000614319 87 ntBASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSM5Q9Y4Y9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 AC120024.1-201ENST00000562672 995 ntBASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 AC009086.3-201ENST00000623486 1008 ntBASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSM5Q9Y4Y9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSM5Q9Y4Y9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LSM5Q9Y4Y9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LSM5Q9Y4Y9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LSM5Q9Y4Y9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms