Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.78■■□□□ 1.56
ZFYVE28Q9HCC9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.78■■□□□ 1.56
ZFYVE28Q9HCC9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.78■■□□□ 1.56
ZFYVE28Q9HCC9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.78■■□□□ 1.56
ZFYVE28Q9HCC9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZFYVE28Q9HCC9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ZFYVE28Q9HCC9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.77■■□□□ 1.56
ZFYVE28Q9HCC9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 AC128676.1-201ENST00000454392 318 ntBASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ZFYVE28Q9HCC9 AP004607.7-201ENST00000527152 1677 ntBASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 AC079089.2-201ENST00000531211 1277 ntBASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.75■■□□□ 1.55
ZFYVE28Q9HCC9 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 EEF1DP3-203ENST00000566025 782 ntBASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
ZFYVE28Q9HCC9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ZFYVE28Q9HCC9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 AC091874.3-201ENST00000512672 1195 ntBASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 AC053503.5-201ENST00000601508 636 ntBASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 AL139125.2-201ENST00000623134 1869 ntBASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
ZFYVE28Q9HCC9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.71■■□□□ 1.55
ZFYVE28Q9HCC9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
ZFYVE28Q9HCC9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ZFYVE28Q9HCC9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.55
ZFYVE28Q9HCC9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZFYVE28Q9HCC9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZFYVE28Q9HCC9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.7■■□□□ 1.54
ZFYVE28Q9HCC9 UNC93B4-201ENST00000505679 747 ntBASIC24.7■■□□□ 1.54
ZFYVE28Q9HCC9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.7■■□□□ 1.54
ZFYVE28Q9HCC9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.7■■□□□ 1.54
ZFYVE28Q9HCC9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZFYVE28Q9HCC9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms