Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 RPS2P55-201ENST00000397318 883 ntBASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 AC107956.1-201ENST00000494359 873 ntBASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN3Q9BTN0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 TPM4P1-201ENST00000436100 807 ntBASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN3Q9BTN0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 AC060766.5-201ENST00000590539 871 ntBASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRFN3Q9BTN0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 AC055733.4-201ENST00000638462 1354 ntBASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.78■■□□□ 1.08
LRFN3Q9BTN0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 AC233263.1-201ENST00000578059 224 ntBASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN3Q9BTN0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.77■■□□□ 1.07
LRFN3Q9BTN0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 MIR4785-201ENST00000585005 73 ntBASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN3Q9BTN0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 LSM12P1-201ENST00000411836 588 ntBASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
LRFN3Q9BTN0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 AC004687.1-201ENST00000579003 1625 ntBASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms