Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 LINC01529-204ENST00000636474 1715 ntBASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB40AQ8WXH6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 AC019069.1-201ENST00000610008 1333 ntBASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40AQ8WXH6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 FP325331.1-202ENST00000623531 1380 ntBASIC18.77■□□□□ 0.6
RAB40AQ8WXH6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40AQ8WXH6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40AQ8WXH6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RAB40AQ8WXH6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40AQ8WXH6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40AQ8WXH6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 AC110285.6-201ENST00000617652 491 ntBASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 AL121603.2-201ENST00000557373 2117 ntBASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40AQ8WXH6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 Z98882.1-201ENST00000622160 2253 ntBASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40AQ8WXH6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 AC009086.3-201ENST00000623486 1008 ntBASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40AQ8WXH6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms