Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB5BP61020 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB5BP61020 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB5BP61020 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5BP61020 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB5BP61020 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB5BP61020 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAB5BP61020 AL391121.1-201ENST00000607967 1349 ntBASIC16.85■□□□□ 0.29
RAB5BP61020 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.85■□□□□ 0.29
RAB5BP61020 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAB5BP61020 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB5BP61020 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.85■□□□□ 0.29
RAB5BP61020 AC098818.2-201ENST00000564925 2320 ntBASIC16.85■□□□□ 0.29
RAB5BP61020 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RAB5BP61020 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAB5BP61020 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.84■□□□□ 0.29
RAB5BP61020 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
RAB5BP61020 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB5BP61020 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB5BP61020 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
RAB5BP61020 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB5BP61020 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB5BP61020 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
RAB5BP61020 FEM1AP4-201ENST00000443167 1987 ntBASIC16.83■□□□□ 0.28
RAB5BP61020 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB5BP61020 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB5BP61020 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB5BP61020 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB5BP61020 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RAB5BP61020 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB5BP61020 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB5BP61020 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RAB5BP61020 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RAB5BP61020 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB5BP61020 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RAB5BP61020 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RAB5BP61020 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB5BP61020 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms