Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SEC61GP60059 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SEC61GP60059 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC11.96□□□□□ -0.49
SEC61GP60059 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.49
SEC61GP60059 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC11.96□□□□□ -0.49
SEC61GP60059 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.96□□□□□ -0.49
SEC61GP60059 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SEC61GP60059 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SEC61GP60059 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
SEC61GP60059 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
SEC61GP60059 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SEC61GP60059 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC11.96□□□□□ -0.5
SEC61GP60059 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.96□□□□□ -0.5
SEC61GP60059 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 LINC01126-201ENST00000623515 1646 ntBASIC11.96□□□□□ -0.5
SEC61GP60059 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.96□□□□□ -0.5
SEC61GP60059 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
SEC61GP60059 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SEC61GP60059 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SEC61GP60059 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SEC61GP60059 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC61GP60059 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SEC61GP60059 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.95□□□□□ -0.5
SEC61GP60059 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
SEC61GP60059 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SEC61GP60059 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.95□□□□□ -0.5
SEC61GP60059 AC004812.2-201ENST00000611079 2094 ntBASIC11.95□□□□□ -0.5
SEC61GP60059 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC11.95□□□□□ -0.5
SEC61GP60059 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
SEC61GP60059 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SEC61GP60059 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SEC61GP60059 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SEC61GP60059 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SEC61GP60059 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SEC61GP60059 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
SEC61GP60059 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC11.94□□□□□ -0.5
SEC61GP60059 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.94□□□□□ -0.5
SEC61GP60059 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SEC61GP60059 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 AC010501.1-201ENST00000606270 1962 ntBASIC11.94□□□□□ -0.5
SEC61GP60059 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SEC61GP60059 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.94□□□□□ -0.5
SEC61GP60059 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SEC61GP60059 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC11.93□□□□□ -0.5
SEC61GP60059 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SEC61GP60059 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.93□□□□□ -0.5
SEC61GP60059 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SEC61GP60059 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms