Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.05■□□□□ 0.48
CD74P04233 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.05■□□□□ 0.48
CD74P04233 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.05■□□□□ 0.48
CD74P04233 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CD74P04233 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD74P04233 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.05■□□□□ 0.48
CD74P04233 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.05■□□□□ 0.48
CD74P04233 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CD74P04233 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD74P04233 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.05■□□□□ 0.48
CD74P04233 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.05■□□□□ 0.48
CD74P04233 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.04■□□□□ 0.48
CD74P04233 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.04■□□□□ 0.48
CD74P04233 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CD74P04233 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CD74P04233 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.04■□□□□ 0.48
CD74P04233 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.04■□□□□ 0.48
CD74P04233 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.04■□□□□ 0.48
CD74P04233 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.04■□□□□ 0.48
CD74P04233 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.04■□□□□ 0.48
CD74P04233 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CD74P04233 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD74P04233 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
CD74P04233 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CD74P04233 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CD74P04233 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.03■□□□□ 0.48
CD74P04233 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.03■□□□□ 0.48
CD74P04233 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD74P04233 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CD74P04233 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CD74P04233 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD74P04233 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD74P04233 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD74P04233 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD74P04233 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.02■□□□□ 0.48
CD74P04233 BHLHE23-202ENST00000612929 1109 ntBASIC18.02■□□□□ 0.48
CD74P04233 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.02■□□□□ 0.48
CD74P04233 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.02■□□□□ 0.47
CD74P04233 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.02■□□□□ 0.47
CD74P04233 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.02■□□□□ 0.47
CD74P04233 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD74P04233 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CD74P04233 AL049796.1-201ENST00000565336 1766 ntBASIC18.02■□□□□ 0.47
CD74P04233 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CD74P04233 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CD74P04233 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CD74P04233 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CD74P04233 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CD74P04233 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 AC079089.2-201ENST00000531211 1277 ntBASIC18.01■□□□□ 0.47
CD74P04233 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CD74P04233 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.01■□□□□ 0.47
CD74P04233 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CD74P04233 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD74P04233 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CD74P04233 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18■□□□□ 0.47
CD74P04233 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CD74P04233 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18■□□□□ 0.47
CD74P04233 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
CD74P04233 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CD74P04233 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18■□□□□ 0.47
CD74P04233 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms