Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 METAP2-201ENST00000261220 1836 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 CACNA1D-228ENST00000638120 1830 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 NUBP1-201ENST00000283027 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AL355309.1-201ENST00000442158 78 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AL158824.1-201ENST00000451825 450 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 RN7SL833P-201ENST00000498758 284 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 SLC25A5P6-201ENST00000515328 886 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 HPR-203ENST00000561690 634 ntTSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AC018697.1-201ENST00000577354 472 ntTSL 4 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 RN7SL733P-201ENST00000582253 329 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AC104996.2-201ENST00000583091 1000 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 MIR4294-201ENST00000584548 76 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AP003973.2-201ENST00000604700 499 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AL157791.2-201ENST00000604758 478 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 Metazoa_SRP.163-201ENST00000611926 277 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 RN7SL248P-201ENST00000615117 329 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 RN7SL453P-201ENST00000620275 329 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AC080080.2-201ENST00000624307 590 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 CLASP2-201ENST00000313350 1597 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 NOXRED1-201ENST00000380835 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 LINC01561-201ENST00000369071 2176 ntBASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC10.89□□□□□ -0.67
NPIPA3F8WFD2 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 KCNAB2-203ENST00000352527 4165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 NFXL1-206ENST00000507489 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AL359918.1-201ENST00000451892 2720 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 CELF5-203ENST00000541430 4268 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 ENO4-202ENST00000369207 1484 ntTSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 CICP5-201ENST00000424045 2215 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 FRMPD1-202ENST00000377765 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 JPT2-203ENST00000382711 894 ntTSL 4 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 HNRNPABP1-201ENST00000406003 734 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 FLJ37035-202ENST00000423178 2600 ntTSL 2 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC006960.2-201ENST00000435254 531 ntTSL 4 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC253536.1-201ENST00000437021 315 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 SOX2-OT-201ENST00000460739 609 ntTSL 4 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC020917.1-201ENST00000494084 893 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 HDAC2-AS2-215ENST00000522697 786 ntTSL 3 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 FAU-206ENST00000529259 1125 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 PRAMENP-203ENST00000548391 1445 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC007923.3-201ENST00000578645 292 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC147067.2-201ENST00000608161 289 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 AC022392.1-201ENST00000609403 744 ntBASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 PRSS1-207ENST00000619214 787 ntTSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NPIPA3F8WFD2 EDNRA-202ENST00000358556 3823 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms