Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 KANK4-203ENST00000371150 3023 ntTSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 AF067845.2-201ENST00000617093 3049 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 C16orf46-201ENST00000299578 1605 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LMO3Q8TAP4 PLUT-201ENST00000499662 2518 ntTSL 3 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 YIPF1-202ENST00000371399 1503 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 CHRNA2-202ENST00000407991 4067 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 POM121L1P-201ENST00000402027 1934 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 FAU-201ENST00000279259 461 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 PTRH2-201ENST00000393038 901 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ACTG1P18-201ENST00000401561 1143 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AL353747.1-201ENST00000404577 267 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 HNRNPA1P49-201ENST00000421336 904 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 FAM238B-202ENST00000423917 1220 ntTSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 HNRNPA1P68-201ENST00000425806 979 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ERG-209ENST00000429727 1052 ntTSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 BX842568.1-201ENST00000435382 551 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AC104117.4-201ENST00000521486 847 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AC015743.1-201ENST00000524123 795 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 LINC02414-201ENST00000537280 494 ntTSL 4 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 GABARAP-206ENST00000577035 762 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 LINC01828-205ENST00000594329 863 ntTSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 EMG1-206ENST00000607161 1087 ntAPPRIS P5 TSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AP001527.2-201ENST00000614441 631 ntBASIC12.69□□□□□ -0.38
LMO3Q8TAP4 IMMT-202ENST00000409051 2515 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 RBM28-202ENST00000415472 2251 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 NPSR1-201ENST00000359791 1410 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ERCC6-203ENST00000447839 3411 ntTSL 2 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 MAGEC2-201ENST00000247452 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 AP000787.1-206ENST00000543150 1567 ntTSL 5 BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 OPTC-201ENST00000367222 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LMO3Q8TAP4 PCNX4-204ENST00000406949 3513 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 AC098679.1-201ENST00000503611 2917 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 CARD8-221ENST00000521613 1903 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 C8orf86-202ENST00000437935 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 FAM86B2-201ENST00000262365 1268 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SPATA22-201ENST00000268981 1280 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 NDUFA7-201ENST00000301457 601 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 RN7SKP176-201ENST00000363673 318 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 TRERNA1-201ENST00000431460 462 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 Z93242.2-201ENST00000445666 394 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 AL157366.1-201ENST00000447435 418 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 HSD3BP2-201ENST00000457615 1118 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 HNRNPA1P42-201ENST00000458678 957 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 FCGR2C-202ENST00000466542 1070 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SLC16A14P1-201ENST00000506846 1117 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 LINC00290-201ENST00000512487 593 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 TPD52L1-206ENST00000524679 915 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 LINC02354-202ENST00000548564 573 ntTSL 4 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 CISTR-201ENST00000570015 581 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 GABARAP-203ENST00000571129 568 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 TMEM95-203ENST00000576060 622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 AC097534.2-204ENST00000608892 284 ntTSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 CISTR-202ENST00000626733 464 ntTSL 3 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 ABHD11-AS1-202ENST00000641969 358 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LMO3Q8TAP4 AC012676.5-201ENST00000624337 1955 ntBASIC12.68□□□□□ -0.38
LMO3Q8TAP4 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms