Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS33BQ9H267 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
VPS33BQ9H267 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS33BQ9H267 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.23■■□□□ 1.79
VPS33BQ9H267 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
VPS33BQ9H267 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
VPS33BQ9H267 CYP2T1P-201ENST00000432607 1285 ntBASIC26.23■■□□□ 1.79
VPS33BQ9H267 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
VPS33BQ9H267 AC053503.5-201ENST00000601508 636 ntBASIC26.23■■□□□ 1.79
VPS33BQ9H267 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.23■■□□□ 1.79
VPS33BQ9H267 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS33BQ9H267 LINC01124-201ENST00000409786 2117 ntBASIC26.23■■□□□ 1.79
VPS33BQ9H267 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
VPS33BQ9H267 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS33BQ9H267 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS33BQ9H267 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
VPS33BQ9H267 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS33BQ9H267 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
VPS33BQ9H267 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS33BQ9H267 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS33BQ9H267 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS33BQ9H267 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
VPS33BQ9H267 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS33BQ9H267 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.21■■□□□ 1.79
VPS33BQ9H267 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.21■■□□□ 1.79
VPS33BQ9H267 AL034346.1-201ENST00000568244 1277 ntBASIC26.21■■□□□ 1.79
VPS33BQ9H267 AP004607.7-201ENST00000527152 1677 ntBASIC26.21■■□□□ 1.79
VPS33BQ9H267 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS33BQ9H267 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.21■■□□□ 1.79
VPS33BQ9H267 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
VPS33BQ9H267 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS33BQ9H267 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS33BQ9H267 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.2■■□□□ 1.78
VPS33BQ9H267 RNA5SP413-201ENST00000516373 109 ntBASIC26.2■■□□□ 1.78
VPS33BQ9H267 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.2■■□□□ 1.78
VPS33BQ9H267 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.2■■□□□ 1.78
VPS33BQ9H267 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS33BQ9H267 PRORSD1P-201ENST00000295112 541 ntBASIC26.19■■□□□ 1.78
VPS33BQ9H267 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS33BQ9H267 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.19■■□□□ 1.78
VPS33BQ9H267 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS33BQ9H267 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.19■■□□□ 1.78
VPS33BQ9H267 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.19■■□□□ 1.78
VPS33BQ9H267 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS33BQ9H267 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.19■■□□□ 1.78
VPS33BQ9H267 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS33BQ9H267 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS33BQ9H267 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS33BQ9H267 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS33BQ9H267 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS33BQ9H267 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 AC069236.1-201ENST00000604339 616 ntBASIC26.18■■□□□ 1.78
VPS33BQ9H267 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS33BQ9H267 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS33BQ9H267 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.18■■□□□ 1.78
VPS33BQ9H267 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
VPS33BQ9H267 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS33BQ9H267 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
VPS33BQ9H267 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.17■■□□□ 1.78
VPS33BQ9H267 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
VPS33BQ9H267 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
VPS33BQ9H267 AC008694.1-202ENST00000636953 945 ntBASIC26.17■■□□□ 1.78
VPS33BQ9H267 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS33BQ9H267 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
VPS33BQ9H267 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
VPS33BQ9H267 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
VPS33BQ9H267 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms