Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 AC092296.2-201ENST00000589470 999 ntBASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 AC026202.3-201ENST00000600805 1127 ntBASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IPQ96QF0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RAB3IPQ96QF0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
RAB3IPQ96QF0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 RAP2CP1-202ENST00000605179 643 ntBASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IPQ96QF0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 ECEL1P2-201ENST00000461596 1295 ntBASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB3IPQ96QF0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.92■□□□□ 0.94
RAB3IPQ96QF0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB3IPQ96QF0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB3IPQ96QF0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB3IPQ96QF0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB3IPQ96QF0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB3IPQ96QF0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
RAB3IPQ96QF0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms