Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RTN4IP1Q8WWV3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 AC009086.3-201ENST00000623486 1008 ntBASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.04■□□□□ 0.48
RTN4IP1Q8WWV3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTN4IP1Q8WWV3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 AC241377.3-202ENST00000626088 1088 ntBASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 AC241585.3-202ENST00000628937 1088 ntBASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 AC245100.8-202ENST00000629247 1058 ntBASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.02■□□□□ 0.48
RTN4IP1Q8WWV3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTN4IP1Q8WWV3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 AL512631.2-201ENST00000604634 923 ntBASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN4IP1Q8WWV3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms