Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00308Q8TCZ7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00308Q8TCZ7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00308Q8TCZ7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 FEM1AP1-201ENST00000431297 1995 ntBASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
LINC00308Q8TCZ7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LINC00308Q8TCZ7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 AC009831.1-201ENST00000580420 1582 ntBASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 AC133552.2-201ENST00000619106 1032 ntBASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00308Q8TCZ7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00308Q8TCZ7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00308Q8TCZ7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms