Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.64■□□□□ 0.89
CLHC1Q8NHS4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 AC010525.1-201ENST00000585559 441 ntBASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLHC1Q8NHS4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 AC079089.2-201ENST00000531211 1277 ntBASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 AC026471.6-201ENST00000622954 1905 ntBASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLHC1Q8NHS4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLHC1Q8NHS4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 MIR4466-201ENST00000606121 54 ntBASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.6■□□□□ 0.89
CLHC1Q8NHS4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 AC005229.4-201ENST00000610085 2198 ntBASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLHC1Q8NHS4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLHC1Q8NHS4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.58■□□□□ 0.89
CLHC1Q8NHS4 AC244015.2-201ENST00000616358 1861 ntBASIC20.58■□□□□ 0.89
CLHC1Q8NHS4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.58■□□□□ 0.89
CLHC1Q8NHS4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLHC1Q8NHS4 OR2I1P-207ENST00000453522 948 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms